Detailed information NTG0736622

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NDL74_RS00270
• Genome accession: NZ_CP106921
• Coordinates: 52740..55868 (-)
• Length: 1042 a.a.
• NCBI ID: WP_265509514.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10272
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 47740..60868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDL74_RS00250 (NDL74_00250)	-	49129..49518 (-)	390	WP_003687278.1	endonuclease domain-containing protein	-
NDL74_RS00260 (NDL74_00260)	-	49681..50060 (-)	380	Protein_49	VOC family protein	-
NDL74_RS00265 (NDL74_00265)	carA	50114..51247 (-)	1134	WP_003699436.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
NDL74_RS00270 (NDL74_00270)	pilC	52740..55868 (-)	3129	WP_265509514.1	PilC family type IV pilus tip adhesin	Machinery gene
NDL74_RS00275 (NDL74_00275)	apbC	57593..58672 (-)	1080	WP_003699443.1	iron-sulfur cluster carrier protein ApbC	-
NDL74_RS00285 (NDL74_00285)	-	59046..59555 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-
NDL74_RS00290 (NDL74_00290)	nadR	59896..60336 (+)	441	WP_003687296.1	MarR family adhesin repressor NadR	-

Sequence

Protein

• Length: 1042 a.a.
• Molecular weight: 114102.76 Da
• Isoelectric Point: 9.9795

>NTDB_id=736622 NDL74_RS00270 WP_265509514.1 52740..55868(-) (pilC) [Neisseria gonorrhoeae strain 10272]
MNKTLKRRVFRHTALYAAILMFSHTGGGGAMAETREYAIIMNGRNQPEVQWSVPSSIKYKDRKRKYTHYKYPRGGSSVSF
NNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDSLKGRANAVDWIRTTRIALAGYSYAGVVCNSTTGCPKLVYKTRFSF
DNPDLAKTGSRLNRHTEPSRDNSPIYKLKDYPWLGVSFNLGAEGTAKDGKVTNKLVSSFDENNSNSNQNLVYTTEGHNIS
LGNWQRESTAMAYYLNAKLHLLDKKKIKDITSKTVRLGVLKPSIDVRKGNTGLSGILSFWATWDIKDTGQIPVKLGLPQV
KAGRCTNAAHPNPKVKPLSPALTAPALWFGPAQNGKVQMYSASVSTYPGSSSSRIFLQELKTKTDPGRPGRHSLAALNER
DIKSREPNFNSRQTVIRLPGGVYRIAPGNSGRVAGFNDNDGKNDTFGIYKDRLVIPEPDEWSEVLLPWTARYYGNDDIFK
TFNQPNNKKQSDKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPITAVGGYLATAANDGMVHLFKRNGTDQRGYELKLSYIP
GTMPRQYFDNDTSALKDSTLAQELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLTKID
NSNLTGVSMFDVKNESKNNGVKLGYTVGTPQIGKIRNGKYAAFLASGYAAKDIVSSDNTTALYVYDLGNGGGSLIKKIEA
PGGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSD
LSEQDVVDKDQQYIYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVV
LRTAFVTIRKYKDDGCGADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNG
YVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREV
FF

Nucleotide

• Length: 3129 bp

>NTDB_id=736622 NDL74_RS00270 WP_265509514.1 52740..55868(-) (pilC) [Neisseria gonorrhoeae strain 10272]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGGAAACCCGTGAATACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTACAGTGGAGTGTGC
CATCTTCAATAAAGTACAAAGACAGGAAGCGCAAATATACTCATTATAAGTACCCACGAGGAGGAAGCTCTGTCTCATTC
AACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAA
GGTTTCCGGTTTTGATACCGATAGTCTGAAAGGGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGCATCGCGCTGG
CAGGCTACAGCTACGCCGGTGTCGTATGCAACAGCACCACAGGCTGTCCCAAACTTGTCTATAAAACCCGATTTTCCTTC
GATAATCCCGACTTGGCAAAAACAGGAAGCAGGCTGAATAGGCACACAGAGCCAAGCCGCGACAATTCGCCCATTTACAA
ATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGCCGAGGGTACCGCCAAAGATGGTAAGGTAACCAACA
AATTGGTATCTTCTTTTGATGAAAACAATAGTAATAGTAATCAAAACCTCGTCTATACCACGGAAGGCCACAATATTTCC
TTGGGCAACTGGCAGCGCGAAAGTACCGCCATGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAAAGAT
TAAAGATATCACCAGCAAAACAGTGCGGTTGGGTGTCTTGAAGCCGAGCATCGATGTGCGGAAAGGAAATACGGGGCTTA
GCGGCATTCTATCTTTTTGGGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCCGCAAGTC
AAAGCCGGGCGCTGCACCAACGCCGCCCACCCCAATCCCAAGGTCAAACCCCTTTCGCCGGCACTGACCGCCCCCGCGCT
GTGGTTCGGCCCTGCGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGGCAGTTCGAGCAGCC
GCATCTTCCTCCAAGAGCTGAAAACTAAAACCGACCCCGGCAGGCCCGGCCGGCATTCCCTCGCCGCTTTGAATGAACGA
GATATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTACCGGATCGCCCC
GGGCAATAGCGGCCGGGTCGCGGGTTTTAATGACAATGACGGCAAAAACGACACTTTCGGCATCTACAAGGACAGGCTCG
TCATACCTGAGCCCGACGAGTGGAGCGAAGTGCTGCTGCCTTGGACGGCCCGGTATTACGGTAATGACGATATATTTAAA
ACATTCAACCAACCAAACAACAAAAAACAAAGCGACAAAAAACAATACAGCCAAAAATACCGCATCCGCACAAAAGAAGA
TGACAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATCTGGCAACCGCCG
CGAACGACGGGATGGTGCACCTGTTTAAAAGAAACGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCC
GGCACGATGCCGCGCCAATATTTTGATAACGACACTTCCGCTCTCAAAGACTCCACCCTCGCCCAAGAGCTGCGCACCTT
TGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACA
GGCAAAAACATTTCTTTATGTTTGGTGCGATGGGCCTTGGCGGCAGAGGCGCATACGCCTTGGATTTGACCAAAATCGAC
AACAGCAACCTGACCGGCGTTTCCATGTTTGATGTCAAAAACGAGAGTAAAAATAATGGCGTGAAATTAGGCTACACCGT
CGGTACGCCGCAAATCGGCAAAATCCGCAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGATATTG
TCAGCAGCGATAATACAACCGCGCTGTATGTGTATGATTTGGGAAACGGCGGTGGTAGTCTGATTAAAAAAATCGAAGCA
CCCGGCGGCAAAGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGG
CGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCGGCGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAG
GCACAAAACCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGAT
TTGAGTGAACAGGATGTAGTCGATAAGGATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGT
AACGGTACAAAACGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGG
GATCCGACGGATCGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTA
TTGCGTACCGCCTTCGTAACCATCCGCAAGTATAAAGACGACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATAC
CGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCG
GCCATAAGACAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGA
TATGTTTACGACAAGCCGGTTAATGTGCGTTATCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGA
TGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCA
CCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTC
TTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (515-851)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	69.602	100	0.705