Detailed information NTG0073641

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: DO80_RS07580
• Genome accession: NZ_AP019730
• Coordinates: 1521732..1523165 (-)
• Length: 477 a.a.
• NCBI ID: WP_108304298.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain TN2wt
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1516732..1528165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DO80_RS07555 (DO80_14610)	recG	1517866..1519731 (-)	1866	WP_108304296.1	ATP-dependent DNA helicase RecG	-
DO80_RS07560 (DO80_14620)	-	1519813..1520166 (+)	354	WP_053459829.1	hypothetical protein	-
DO80_RS07565 (DO80_14630)	-	1520170..1520805 (+)	636	WP_000668030.1	outer membrane protein	-
DO80_RS07570 (DO80_14640)	-	1520802..1521554 (-)	753	WP_108304297.1	exodeoxyribonuclease III	-
DO80_RS07580 (DO80_14650)	comH	1521732..1523165 (-)	1434	WP_108304298.1	competence protein	Machinery gene
DO80_RS07585 (DO80_14660)	dnaA	1523386..1524753 (-)	1368	WP_108304299.1	chromosomal replication initiator protein DnaA	-
DO80_RS07590 (DO80_14670)	-	1524906..1525448 (+)	543	WP_108304394.1	purine-nucleoside phosphorylase	-
DO80_RS07595 (DO80_14680)	-	1525484..1525723 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
DO80_RS07600 (DO80_14690)	glmS	1525724..1527517 (+)	1794	WP_108304300.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54626.45 Da
• Isoelectric Point: 7.0006

>NTDB_id=73641 DO80_RS07580 WP_108304298.1 1521732..1523165(-) (comH) [Helicobacter pylori strain TN2wt]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHQIPSLNAPIQKPQNKPTSSQQSLQNFPYTESKLGSKNPKNSLLQPLAT
PNKISSANEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTPNANINEHNESNENRDNGEKQAIRDPNVKEFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKATYERPKQDDQIEPTFYETSELAYSSTRKSEITHNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=73641 DO80_RS07580 WP_108304298.1 1521732..1523165(-) (comH) [Helicobacter pylori strain TN2wt]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATTACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCAAATACCTTCTTTAAACGCGCCCATACAAAAACCACAAAATAAACCCACTTCATCGCAACAAT
CTCTTCAAAACTTTCCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTCAGAAGA
TCAAGAAAACAATCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACTCCTAACGCTAATATTAATGAAC
ACAATGAAAGCAATGAAAATAGGGATAATGGGGAAAAACAAGCGATTAGAGATCCTAATGTTAAAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAGCAGACTGC
GACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGAGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATCAAATAG
AGCCAACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCTAAAA
GCACGCCTTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.693	100	0.931