Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   OE105_RS07120 Genome accession   NZ_CP106877
Coordinates   1492165..1493868 (-) Length   567 a.a.
NCBI ID   WP_275419525.1    Uniprot ID   A0A9E8RW65
Organism   Fervidibacillus halotolerans strain MEBiC13594     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1487165..1498868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OE105_RS07100 (OE105_07100) - 1487292..1488017 (-) 726 WP_275419521.1 glycerophosphodiester phosphodiesterase -
  OE105_RS07105 (OE105_07105) spo0A 1488311..1489093 (-) 783 WP_275419522.1 sporulation transcription factor Spo0A -
  OE105_RS07110 (OE105_07110) - 1489251..1490453 (+) 1203 WP_275419523.1 transposase -
  OE105_RS07115 (OE105_07115) spoIVB 1490753..1492036 (-) 1284 WP_275419524.1 SpoIVB peptidase -
  OE105_RS07120 (OE105_07120) recN 1492165..1493868 (-) 1704 WP_275419525.1 DNA repair protein RecN Machinery gene
  OE105_RS07125 (OE105_07125) ahrC 1493889..1494341 (-) 453 WP_275419526.1 transcriptional regulator AhrC/ArgR -
  OE105_RS07130 (OE105_07130) - 1494451..1495313 (-) 863 Protein_1404 TlyA family RNA methyltransferase -
  OE105_RS07135 (OE105_07135) dxs 1495317..1497209 (-) 1893 WP_275419528.1 1-deoxy-D-xylulose-5-phosphate synthase -
  OE105_RS07140 (OE105_07140) - 1497234..1497821 (-) 588 WP_338030898.1 hypothetical protein -

Sequence

Protein


Download         Length: 567 a.a.        Molecular weight: 64399.54 Da        Isoelectric Point: 5.2916

>NTDB_id=736322 OE105_RS07120 WP_275419525.1 1492165..1493868(-) (recN) [Fervidibacillus halotolerans strain MEBiC13594]
MLAELSIKNFAIIDELTVSFQKGFTVLTGETGAGKSIIIDAIHLLVGGRGSVDFVRHGTTKAEIEGLFLIEDDHPAIWKL
REIGIDVEEGMVVLKRDIHVSGKSVCRINGKLVTISSLRELGSTLVDIHGQHEHQELMDRTSHLRLLDEFGGDEVKKTLK
EYALIFREYEKLKKELQKLTENEQQMAQKLDLLSFQHQEILGANLQIGEDDTLLKEKKKLMNYEQLYNAIQMGYDALQGE
QKGLDWLGLAMNHLEDAAQIDEQFKSLYDLVSNFYYQLEDVTGELRQYLDQFEFDPEKINQVEERLSEIHQLKRKYGKSI
EEILEYAAKIEEEIELITNRESYIEKMTSKLRSVEKDLLVEGNHLSNLRKRMAKQLTKAIQKELKDLYMEKTEFEVHFDT
GSDFKPDGIDEVEFLISTNPGEPKKPLAKIASGGELSRIMLALKTIFSTHQGVTSIIFDEVDTGVSGRVAQSIGEKIFHI
SIGSQVLSITHLPQVASMGDHHYFITKEMKGDRTVTSIRTLNEEERTTEIARMISGSSITEATITHAKEMLDIARKKKSN
SVPKAEK

Nucleotide


Download         Length: 1704 bp        

>NTDB_id=736322 OE105_RS07120 WP_275419525.1 1492165..1493868(-) (recN) [Fervidibacillus halotolerans strain MEBiC13594]
ATGTTAGCCGAATTATCGATAAAAAATTTCGCCATCATCGATGAACTCACCGTCTCCTTTCAAAAAGGGTTTACCGTACT
AACCGGTGAAACAGGTGCTGGAAAATCCATTATTATCGATGCGATTCATTTACTCGTCGGTGGAAGGGGTTCGGTTGATT
TTGTCCGTCACGGAACAACGAAAGCGGAAATCGAAGGTCTTTTTTTAATTGAAGATGATCATCCTGCCATTTGGAAACTG
CGTGAAATTGGAATTGATGTGGAAGAAGGAATGGTCGTATTAAAACGGGATATCCATGTATCAGGAAAAAGCGTTTGTCG
AATTAACGGAAAGCTCGTTACCATTTCTTCATTGCGGGAGTTAGGAAGTACTCTTGTGGATATCCACGGTCAACATGAAC
ATCAAGAGTTGATGGATCGTACGTCCCATTTGCGATTGTTGGATGAATTTGGCGGAGATGAAGTGAAAAAGACGTTAAAG
GAATACGCATTAATTTTCAGGGAATACGAAAAACTAAAAAAGGAATTACAGAAATTAACCGAAAACGAACAACAGATGGC
ACAAAAATTAGACCTCCTTTCTTTCCAACATCAAGAAATATTAGGTGCTAATTTACAGATTGGGGAAGATGATACGCTCC
TTAAAGAAAAGAAAAAATTAATGAATTATGAACAACTATATAATGCAATACAAATGGGATACGATGCCCTTCAAGGAGAA
CAAAAGGGCCTCGACTGGCTAGGTTTGGCCATGAACCATTTGGAAGATGCTGCACAAATTGATGAACAGTTTAAATCCCT
ATACGATTTAGTTAGCAATTTTTATTATCAATTGGAAGATGTGACCGGTGAATTAAGGCAATATTTGGACCAATTCGAAT
TTGACCCGGAAAAAATTAATCAGGTGGAAGAACGATTAAGTGAAATTCATCAGTTGAAACGAAAATACGGAAAATCGATC
GAAGAAATTTTAGAATATGCAGCAAAAATTGAAGAGGAGATCGAGTTAATTACGAACCGGGAAAGCTATATTGAAAAGAT
GACGAGTAAATTACGTTCTGTAGAAAAGGATTTACTCGTTGAAGGAAACCATCTATCCAATTTGCGAAAACGGATGGCCA
AACAATTAACGAAAGCGATCCAAAAGGAATTGAAAGATCTATATATGGAAAAGACCGAATTTGAAGTCCACTTTGACACT
GGGTCGGATTTTAAACCGGACGGAATCGACGAGGTAGAATTTTTAATTAGTACGAATCCTGGAGAGCCGAAAAAACCTCT
TGCGAAAATCGCATCTGGTGGAGAACTCTCGAGAATCATGTTAGCGCTAAAAACGATTTTTTCCACCCATCAAGGGGTTA
CTTCAATTATTTTTGATGAGGTGGATACAGGTGTTAGCGGACGGGTCGCCCAATCTATAGGTGAAAAAATCTTTCATATT
TCCATCGGCTCGCAAGTTTTATCCATTACCCATTTGCCTCAAGTTGCCAGCATGGGAGATCACCATTATTTTATAACGAA
GGAAATGAAAGGGGACCGTACCGTCACTTCGATCCGTACTTTGAACGAAGAAGAAAGAACTACCGAAATTGCCCGAATGA
TTTCTGGAAGCAGTATAACGGAAGCAACGATTACTCACGCGAAGGAAATGTTGGATATTGCCCGGAAGAAAAAATCCAAC
TCAGTGCCCAAGGCGGAAAAATAG

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

56.969

100

0.577