Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OE105_RS02115 Genome accession   NZ_CP106877
Coordinates   451724..452671 (+) Length   315 a.a.
NCBI ID   WP_275421077.1    Uniprot ID   A0A9E8RXN6
Organism   Fervidibacillus halotolerans strain MEBiC13594     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 446724..457671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OE105_RS02110 (OE105_02110) - 450276..450926 (+) 651 WP_275421076.1 hypothetical protein -
  OE105_RS02115 (OE105_02115) ceuB 451724..452671 (+) 948 WP_275421077.1 ABC transporter permease Machinery gene
  OE105_RS02120 (OE105_02120) - 452668..453624 (+) 957 WP_275421078.1 iron chelate uptake ABC transporter family permease subunit -
  OE105_RS02125 (OE105_02125) - 453618..454376 (+) 759 WP_275421079.1 ABC transporter ATP-binding protein -
  OE105_RS02130 (OE105_02130) - 454542..455501 (+) 960 WP_275421080.1 siderophore ABC transporter substrate-binding protein -
  OE105_RS02135 (OE105_02135) - 455641..455955 (+) 315 WP_275421081.1 antibiotic biosynthesis monooxygenase -
  OE105_RS02140 (OE105_02140) - 456120..457163 (+) 1044 WP_275422069.1 lactonase family protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34708.97 Da        Isoelectric Point: 10.2751

>NTDB_id=736309 OE105_RS02115 WP_275421077.1 451724..452671(+) (ceuB) [Fervidibacillus halotolerans strain MEBiC13594]
MKIRYMLLILVILSIVSVFIGVKEITPLDLFNLTDETVQILLISRLPRLISILIAGASMSIAGLIMQQLSRNKFVSPTTA
GTMDFARLGILVSMIVFASSSPLVKMVVAFIFALAGTFLFMKILENIKFKDAVFIPLVGLMLGNIVSSVATFFAYRSDLI
QNISSWLIGDFSLIIKGRYELIFVSLPLLIIAYMYANRFTIAGLGEDFSKNLGLNYRQVVNIGLSIVALITSSVILTVGM
IPFLGLIIPNIVSIYQGDNLKKSLSHTAILGAIFVLFSDILGRIIIFPYEIPINLTVGVIGSGIFIYLLLRRQRT

Nucleotide


Download         Length: 948 bp        

>NTDB_id=736309 OE105_RS02115 WP_275421077.1 451724..452671(+) (ceuB) [Fervidibacillus halotolerans strain MEBiC13594]
ATGAAAATACGTTACATGTTGCTAATTTTAGTGATTCTTTCCATTGTATCCGTTTTTATCGGAGTGAAGGAAATTACACC
CCTTGATTTATTTAACTTAACAGATGAAACTGTACAAATTTTATTAATCAGTCGATTACCGAGATTGATCAGTATATTGA
TTGCCGGTGCTAGCATGAGTATTGCCGGTTTAATTATGCAACAGTTGAGTCGAAATAAATTCGTTTCTCCGACGACGGCA
GGAACGATGGATTTTGCCCGCTTAGGGATTCTCGTTTCGATGATCGTATTTGCATCGAGCAGCCCTTTAGTGAAAATGGT
CGTGGCTTTCATATTTGCTTTAGCAGGAACATTTTTATTTATGAAAATACTTGAGAATATTAAATTTAAAGATGCTGTTT
TCATTCCTTTAGTCGGGCTGATGTTAGGAAATATTGTTAGTTCCGTTGCCACATTTTTTGCATATCGGAGCGATTTGATT
CAAAATATTTCTTCCTGGTTAATCGGGGATTTTTCGTTAATCATCAAGGGGAGATATGAATTAATCTTTGTTAGTTTGCC
GTTATTAATCATCGCCTATATGTATGCAAATCGCTTTACGATCGCTGGATTAGGAGAAGACTTTTCGAAAAATCTCGGAT
TAAATTATCGACAAGTCGTTAATATCGGCTTAAGTATCGTTGCACTGATTACTTCTTCAGTCATTTTAACGGTAGGAATG
ATTCCTTTCCTCGGGTTAATTATTCCGAATATCGTTTCAATTTACCAAGGAGACAACTTGAAAAAAAGTTTGTCCCATAC
CGCCATTCTTGGAGCCATCTTTGTTTTGTTTAGTGATATTCTCGGTCGTATCATTATTTTTCCATATGAAATTCCGATTA
ACTTAACCGTAGGGGTCATCGGAAGTGGAATCTTTATTTACTTGCTATTGAGGAGACAACGTACATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.438

99.365

0.511