Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   P8R99_RS11505 Genome accession   NZ_CP121160
Coordinates   2211645..2212085 (+) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain S5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2206645..2217085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R99_RS11485 - 2206762..2207271 (-) 510 WP_000870955.1 DUF308 domain-containing protein -
  P8R99_RS11490 gdhA 2207439..2208788 (+) 1350 Protein_2188 NADP-specific glutamate dehydrogenase -
  P8R99_RS11495 - 2208858..2209268 (+) 411 WP_000594937.1 peptide deformylase -
  P8R99_RS11500 - 2209305..2211377 (-) 2073 WP_000726925.1 bifunctional metallophosphatase/5'-nucleotidase -
  P8R99_RS11505 rcrR 2211645..2212085 (+) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  P8R99_RS11510 rcrP 2212132..2213949 (+) 1818 WP_000481824.1 ABC transporter ATP-binding protein Regulator
  P8R99_RS11515 rcrQ 2213939..2215693 (+) 1755 WP_000851086.1 ABC transporter ATP-binding protein Regulator
  P8R99_RS11520 - 2215801..2216427 (+) 627 WP_000449638.1 GTP pyrophosphokinase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=736289 P8R99_RS11505 WP_000431168.1 2211645..2212085(+) (rcrR) [Streptococcus agalactiae strain S5]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=736289 P8R99_RS11505 WP_000431168.1 2211645..2212085(+) (rcrR) [Streptococcus agalactiae strain S5]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATTTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411