Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P8R99_RS04160 Genome accession   NZ_CP121160
Coordinates   835098..835874 (+) Length   258 a.a.
NCBI ID   WP_129316724.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain S5     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 830098..840874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R99_RS04145 - 832149..832577 (-) 429 WP_017284935.1 GNAT family N-acetyltransferase -
  P8R99_RS04150 - 832611..833375 (-) 765 WP_000586353.1 nucleoside phosphorylase -
  P8R99_RS04155 rlmD 833644..834999 (-) 1356 WP_017284934.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  P8R99_RS04160 recX 835098..835874 (+) 777 WP_129316724.1 recombination regulator RecX Regulator
  P8R99_RS04165 - 835958..836491 (+) 534 WP_001239184.1 DUF402 domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30788.68 Da        Isoelectric Point: 9.8204

>NTDB_id=736220 P8R99_RS04160 WP_129316724.1 835098..835874(+) (recX) [Streptococcus agalactiae strain S5]
MKITKIEKKKRRYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKELIKYL
QQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKFSKKYDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=736220 P8R99_RS04160 WP_129316724.1 835098..835874(+) (recX) [Streptococcus agalactiae strain S5]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACGTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGATAGTTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATATGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAACTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTGATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAGGGGCCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAATTTTCAAGACTTAGCATCCAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAACAAACTTCCACTAAAAGCATTAAAAGATAAATTGATGCAGAGCTTAACTACAAAAGGATT
TGATTATCAGATAGCGCATACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTCTCAAAAAAATATGACCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

38.314

100

0.388