Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P8R98_RS10020 Genome accession   NZ_CP121159
Coordinates   2044486..2045262 (+) Length   258 a.a.
NCBI ID   WP_000704975.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain S1     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2039486..2050262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R98_RS10005 - 2040327..2041235 (-) 909 WP_278043454.1 glycosyltransferase family 2 protein -
  P8R98_RS10010 - 2041465..2042640 (-) 1176 WP_278043406.1 IS256-like element ISSag11 family transposase -
  P8R98_RS10015 rlmD 2043032..2044387 (-) 1356 WP_001103615.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  P8R98_RS10020 recX 2044486..2045262 (+) 777 WP_000704975.1 recombination regulator RecX Regulator
  P8R98_RS10025 - 2045346..2045879 (+) 534 WP_001239184.1 DUF402 domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30717.64 Da        Isoelectric Point: 9.8205

>NTDB_id=736158 P8R98_RS10020 WP_000704975.1 2044486..2045262(+) (recX) [Streptococcus agalactiae strain S1]
MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIINAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYL
QQHDIDSKIIPQIINNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQSKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKFSKKYDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=736158 P8R98_RS10020 WP_000704975.1 2044486..2045262(+) (recX) [Streptococcus agalactiae strain S1]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACTTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGATAATTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATACGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAAGTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTAATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAGGGGCCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAACTTTCAAGACTTAGCATCCAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAGCAAACTTCCACTAAAAGCACTAAAAGATAAATTGATGCAGAGCTTAACTACAAAAGGATT
TGATTATCAGATAGCGCATACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTCTCAAAAAAATATGACCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

38.314

100

0.388