Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   P8R98_RS01160 Genome accession   NZ_CP121159
Coordinates   190791..191564 (-) Length   257 a.a.
NCBI ID   WP_278043477.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain S1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 185791..196564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R98_RS01130 - 186311..186514 (-) 204 WP_001871843.1 hypothetical protein -
  P8R98_RS01135 - 186507..186647 (-) 141 WP_001871845.1 helix-turn-helix transcriptional regulator -
  P8R98_RS01140 - 186772..186969 (-) 198 WP_000285199.1 DUF951 family protein -
  P8R98_RS01145 - 186979..187872 (-) 894 WP_000987440.1 diacylglycerol kinase family protein -
  P8R98_RS01150 dnaN 187930..189066 (-) 1137 WP_000581134.1 DNA polymerase III subunit beta -
  P8R98_RS01155 dnaA 189221..190582 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  P8R98_RS01160 spo0J 190791..191564 (-) 774 WP_278043477.1 ParB/RepB/Spo0J family partition protein Regulator
  P8R98_RS01165 htrA 191662..192891 (-) 1230 WP_000728357.1 trypsin-like peptidase domain-containing protein Regulator
  P8R98_RS01170 rlmH 193092..193571 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29229.67 Da        Isoelectric Point: 9.8145

>NTDB_id=736089 P8R98_RS01160 WP_278043477.1 190791..191564(-) (spo0J) [Streptococcus agalactiae strain S1]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRSYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=736089 P8R98_RS01160 WP_278043477.1 190791..191564(-) (spo0J) [Streptococcus agalactiae strain S1]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTAGTAGCCGGAGAACGACGGTTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTTCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.255

99.222

0.568