Detailed information NTG0736071

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P6H86_RS22330
• Genome accession: NZ_CP121157
• Coordinates: 4533481..4534506 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain E89
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4528481..4539506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P6H86_RS22310 (P6H86_22310)	metJ	4529542..4529859 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
P6H86_RS22315 (P6H86_22315)	yiiX	4530043..4530651 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
P6H86_RS22320 (P6H86_22320)	rpmE	4530712..4530924 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
P6H86_RS22325 (P6H86_22325)	priA	4531127..4533325 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
P6H86_RS22330 (P6H86_22330)	cytR	4533481..4534506 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
P6H86_RS22335 (P6H86_22335)	ftsN	4534598..4535557 (+)	960	WP_000068828.1	cell division protein FtsN	-
P6H86_RS22340 (P6H86_22340)	hslV	4535650..4536180 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P6H86_RS22345 (P6H86_22345)	hslU	4536190..4537521 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
P6H86_RS22350 (P6H86_22350)	menA	4537588..4538514 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P6H86_RS22355 (P6H86_22355)	rraA	4538607..4539092 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P6H86_RS22360 (P6H86_22360)	zapB	4539177..4539422 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=736071 P6H86_RS22330 WP_000644904.1 4533481..4534506(+) (cytR) [Escherichia coli strain E89]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=736071 P6H86_RS22330 WP_000644904.1 4533481..4534506(+) (cytR) [Escherichia coli strain E89]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628