Detailed information NTG0735906

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P6H84_RS22625
• Genome accession: NZ_CP121153
• Coordinates: 4672277..4673302 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain E57
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4667277..4678302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P6H84_RS22605 (P6H84_22605)	metJ	4668462..4668779 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
P6H84_RS22610 (P6H84_22610)	yiiX	4668839..4669447 (+)	609	WP_000702307.1	YiiX family permuted papain-like enzyme	-
P6H84_RS22615 (P6H84_22615)	rpmE	4669508..4669720 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
P6H84_RS22620 (P6H84_22620)	priA	4669923..4672121 (+)	2199	WP_001361702.1	primosomal protein N'	Machinery gene
P6H84_RS22625 (P6H84_22625)	cytR	4672277..4673302 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
P6H84_RS22630 (P6H84_22630)	ftsN	4673394..4674353 (+)	960	WP_000068841.1	cell division protein FtsN	-
P6H84_RS22635 (P6H84_22635)	hslV	4674446..4674976 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P6H84_RS22640 (P6H84_22640)	hslU	4674986..4676317 (+)	1332	WP_001293340.1	HslU--HslV peptidase ATPase subunit	-
P6H84_RS22645 (P6H84_22645)	menA	4676384..4677310 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P6H84_RS22650 (P6H84_22650)	rraA	4677403..4677888 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=735906 P6H84_RS22625 WP_000644904.1 4672277..4673302(+) (cytR) [Escherichia coli strain E57]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=735906 P6H84_RS22625 WP_000644904.1 4672277..4673302(+) (cytR) [Escherichia coli strain E57]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGATTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628