Detailed information NTG0735787

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: LLE39_RS10235
• Genome accession: NZ_CP106819
• Coordinates: 1948696..1951656 (-)
• Length: 986 a.a.
• NCBI ID: WP_229956962.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10791
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1943696..1956656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLE39_RS10225 (LLE39_10225)	yccS	1944873..1947023 (+)	2151	WP_003692098.1	YccS family putative transporter	-
LLE39_RS10230 (LLE39_10230)	-	1947505..1947789 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
LLE39_RS10235 (LLE39_10235)	pilC	1948696..1951656 (-)	2961	WP_229956962.1	PilC family type IV pilus tip adhesin	Machinery gene
LLE39_RS11890	pilC	1951656..1951778 (-)	123	WP_317629298.1	hypothetical protein	Machinery gene
LLE39_RS10240 (LLE39_10240)	-	1952465..1952728 (+)	264	WP_229433460.1	hypothetical protein	-
LLE39_RS10245 (LLE39_10245)	gnd	1952808..1954256 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
LLE39_RS10250 (LLE39_10250)	waaA	1954319..1955590 (+)	1272	WP_229930301.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
LLE39_RS10255 (LLE39_10255)	-	1955631..1956080 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 986 a.a.
• Molecular weight: 108134.80 Da
• Isoelectric Point: 9.7848

>NTDB_id=735787 LLE39_RS10235 WP_229956962.1 1948696..1951656(-) (pilC) [Neisseria gonorrhoeae strain 10791]
MNAQNQPEVKSNVPYSIKDKDRKRVFDYTSQKSSLGRTNNFISFNNNDEVVARKNGTAVFGTATYLPPYGKVSGFDADAL
KERANAVDWIRTTRPGLAGYAYTDVICRDAGQCPQLVYETKFAFGQQGLQRNGNKLDIYEDKSRDNSPIYKLKDYPWLGV
SFNLGSENTVKNGRSSGRLISSFSENNNNQTIVSTTRDRPISLGDRQREHTAVAYYLNAKLHLLDKKRIKDIAQGKTVDL
GTLRPRVETTGRNWLSYWATWKIEDKGNITVRLGLPEVKAGRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSAS
VSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGEIKSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGN
NTGKNDTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGY
LATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMPRKDIESNDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFM
FGAMGLGGRGAYALDLSKTNGNYPAAASLFDVKDGDKKGKNRVEVELGYTVGTPQIGKTQNGTYSAFLASGYAAKQIDDS
TNKTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTK
PITSAPAVSRLADKRVVIFGTGSDLSEQDVVDKDQQYIYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSD
GSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGCGADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHK
TTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLL
MNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 2961 bp

>NTDB_id=735787 LLE39_RS10235 WP_229956962.1 1948696..1951656(-) (pilC) [Neisseria gonorrhoeae strain 10791]
ATGAACGCGCAAAACCAGCCCGAGGTAAAGTCGAATGTGCCATATTCAATAAAGGACAAAGACAGGAAGCGGGTATTTGA
CTATACGAGCCAGAAAAGCAGCTTAGGCAGGACAAACAATTTTATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAA
AAAACGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTG
AAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGGCCCGGGCTGGCAGGCTACGCCTACACCGACGTCATATG
CAGAGACGCAGGGCAATGCCCCCAACTTGTCTATGAGACCAAATTTGCCTTCGGTCAACAAGGGTTGCAAAGAAATGGCA
ACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTA
TCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATGGCAGATCATCCGGCAGATTGATATCTTCTTTTAGTGAAAACAA
TAATAATCAAACCATCGTCTCTACGACACGAGACCGCCCTATTTCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGG
CCTATTATCTGAACGCCAAGCTGCACCTGCTGGACAAAAAAAGGATTAAAGATATCGCCCAAGGCAAAACAGTGGATTTG
GGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAAACTGGCTAAGTTATTGGGCTACGTGGAAGATTGAAGATAAAGG
GAACATTACAGTCCGCCTCGGCCTGCCGGAAGTCAAAGCAGGCCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAG
CCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCG
GTTTCTACCTACCCCGACAGTTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGG
CCGCTATTCCCTCAAATCTTTGAATGATGGTGAGATTAAAAGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCC
GATTGGATGACGGCGTACATTTGATCAAACTGAATGGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAAC
AACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCTGACGAGTGGAAAAAAGTGCT
GCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAA
GATACCGCATCCGCGACAACAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTAT
CTGGCAACTTCTGCCAACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCT
CAGCTACATCCCGGGTACGATGCCGCGCAAGGATATTGAAAGCAACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTG
CCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATG
TTCGGCGCGATGGGTTTGGGCGGCAGGGGCGCGTATGCCTTGGATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGC
TTCCCTGTTTGATGTCAAAGATGGCGATAAGAAAGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGC
CGCAAATCGGCAAAACCCAAAACGGCACATACTCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAACAAATTGACGACTCA
ACAAATAAAACCGCGCTGTATGTGTATGATTTGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGG
CAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGG
GCGGCAATATGTACCGCTTTGATTTGAGCGGCGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAA
CCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGA
ACAGGATGTAGTCGATAAGGATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTAC
AAAACGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGAC
GGATCGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTAC
CGCCTTCGTAACCATCCGCAAGTATAAAGACGACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACG
GCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAG
ACAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTA
CGACAAGCCGGTTAATGTGCGTTATCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGCGATGCGGGCG
GCAGCGGTATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTG
ATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTG
A

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (466-795)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.421	100	0.74