Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FNL83_RS04035 | Genome accession | NZ_AP019721 |
| Coordinates | 824025..824420 (+) | Length | 131 a.a. |
| NCBI ID | WP_002457121.1 | Uniprot ID | A0A7H5C5S7 |
| Organism | Staphylococcus epidermidis strain NBRC 100911 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 819025..829420
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNL83_RS04010 (Sep02g_07590) | - | 820444..820848 (+) | 405 | WP_002447782.1 | F0F1 ATP synthase subunit epsilon | - |
| FNL83_RS04015 (Sep02g_07600) | - | 820997..821230 (+) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| FNL83_RS04020 (Sep02g_07610) | murA | 821340..822605 (+) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FNL83_RS04025 (Sep02g_07620) | fabZ | 822639..823076 (+) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FNL83_RS04030 (Sep02g_07630) | - | 823394..823834 (-) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| FNL83_RS04035 (Sep02g_07640) | ssb | 824025..824420 (+) | 396 | WP_002457121.1 | single-stranded DNA-binding protein | Machinery gene |
| FNL83_RS04040 (Sep02g_07650) | - | 824808..825467 (+) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| FNL83_RS04045 (Sep02g_07660) | tenA | 825751..826440 (+) | 690 | WP_001829894.1 | thiaminase II | - |
| FNL83_RS04050 (Sep02g_07670) | thiD | 826433..827254 (+) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FNL83_RS04055 (Sep02g_07680) | thiM | 827247..828035 (+) | 789 | WP_002469583.1 | hydroxyethylthiazole kinase | - |
| FNL83_RS04060 (Sep02g_07690) | thiE | 828041..828679 (+) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15159.02 Da Isoelectric Point: 5.2661
>NTDB_id=73572 FNL83_RS04035 WP_002457121.1 824025..824420(+) (ssb) [Staphylococcus epidermidis strain NBRC 100911]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=73572 FNL83_RS04035 WP_002457121.1 824025..824420(+) (ssb) [Staphylococcus epidermidis strain NBRC 100911]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |