Detailed information NTG0735691

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: OCL41_RS10295
• Genome accession: NZ_CP106815
• Coordinates: 1958100..1961189 (-)
• Length: 1029 a.a.
• NCBI ID: WP_263057154.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10562
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1953100..1966189

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCL41_RS10285 (OCL41_10285)	yccS	1954277..1956427 (+)	2151	WP_003692098.1	YccS family putative transporter	-
OCL41_RS10290 (OCL41_10290)	-	1956909..1957193 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
OCL41_RS10295 (OCL41_10295)	pilC	1958100..1961189 (-)	3090	WP_263057154.1	PilC family type IV pilus tip adhesin	Machinery gene
OCL41_RS10300 (OCL41_10300)	-	1961876..1962139 (+)	264	WP_229433460.1	hypothetical protein	-
OCL41_RS10305 (OCL41_10305)	gnd	1962219..1963667 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
OCL41_RS10310 (OCL41_10310)	waaA	1963730..1965001 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
OCL41_RS10315 (OCL41_10315)	-	1965042..1965491 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1029 a.a.
• Molecular weight: 113010.52 Da
• Isoelectric Point: 9.8904

>NTDB_id=735691 OCL41_RS10295 WP_263057154.1 1958100..1961189(-) (pilC) [Neisseria gonorrhoeae strain 10562]
MNKTLKRQVFRHTALYAAIDVFPYRRGGGGPPAQAQTYKYAIVMNAQNQPEVKSNVPYSIKDKDRKRVFDYTSQKSSLGR
TNNFISFNNNDEVVARKNGTAVFGTATYLPPYGKVSGFDADALKERANAVDWIRTTRPGLAGYAYTDVICRDAGQCPQLV
YETKFAFGQQGLQRNGNKLDIYEDKSRDNSPIYKLKDYPWLGVSFNLGSENTVKNGRSSGRLISSFSENNNNQTIVSTTR
DRPISLGDRQREHTAVAYYLNAKLHLLDKKRIKDIAQGKTVDLGTLRPRVETTGRNWLSYWVTWKIEDKGNITVRLGLPE
VKAGRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDG
EIKSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLEADEWKKVLLPWTVRGPDN
DNKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMPRK
DIESNDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFMFGAMGLGGRGAYALDLSKTNGNYPAAAPLFDVKDGDK
KGKNRVEVELGYTVGTPQIGKTQNGTYSAFLASGYAAKQIDDSTNKTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLV
DKDLDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSDLSEQDVVDKDQQY
IYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKD
DGCGADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLD
EKKTDDFPVTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3090 bp

>NTDB_id=735691 OCL41_RS10295 WP_263057154.1 1958100..1961189(-) (pilC) [Neisseria gonorrhoeae strain 10562]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATTGATGTTTTCCCATACCGGCGGGG
GGGGGGGGGCCCCCCGGCGCAGGCGCAAACGTATAAATACGCTATTGTGATGAACGCGCAAAACCAGCCCGAGGTAAAGT
CGAATGTGCCATATTCAATAAAGGACAAAGACAGGAAGCGGGTATTTGACTATACGAGCCAGAAAAGCAGCTTAGGCAGG
ACAAACAATTTTATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAAAAAACGGTACTGCCGTTTTTGGCACAGCCAC
CTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTGAAAGAGCGCGCCAATGCCGTTGATTGGATTC
GTACCACCCGGCCCGGGCTGGCAGGCTACGCCTACACCGACGTCATATGCAGAGACGCAGGGCAATGCCCCCAACTTGTC
TATGAGACCAAATTTGCCTTCGGTCAACAAGGGTTGCAAAGAAATGGCAACAAGCTGGATATATACGAAGACAAAAGCCG
CGACAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCA
AAAATGGCAGATCATCCGGCAGATTGATATCTTCTTTTAGTGAAAACAATAATAATCAAACCATCGTCTCTACGACACGA
GACCGCCCTATTTCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAGCTGCACCTGCT
GGACAAAAAAAGGATTAAAGATATCGCCCAAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGACAG
GACGAAACTGGCTAAGTTATTGGGTTACGTGGAAGATTGAAGATAAAGGGAACATTACAGTCCGCCTCGGCCTGCCGGAA
GTCAAAGCAGGCCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAGCCCTTTCGCCGGCACTGACCGCCCCCGCGCT
GTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCC
GCATCTTCCTCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGGCCGCTATTCCCTCAAATCTTTGAATGATGGT
GAGATTAAAAGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACT
GAATGGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTG
TTAAGGAAGCGAACGTCAATCTTGAAGCTGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAAT
GACAATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGGCAATCG
CGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACGACGGGATGGTGC
ATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCGGGTACGATGCCGCGCAAG
GATATTGAAAGCAACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGG
CGTGGACGGCGGCTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATGTTCGGCGCGATGGGTTTGGGCGGCAGGGGCG
CGTATGCCTTGGATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGCTCCCCTGTTTGATGTCAAAGATGGCGATAAG
AAAGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCAAAACGGCACATA
CTCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAACAAATTGACGACTCAACAAATAAAACCGCGCTGTATGTGTATGATT
TGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTG
GATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCGG
CGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAACCGATTACCTCCGCGCCCGCCGTTTCCCGAC
TGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGAACAGGATGTAGTCGATAAGGATCAACAATAT
ATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGGCTGCTCGAGCA
AGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGATCGGGCAGTAAGGGGTGGGTAGTGAAGC
TGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACCATCCGCAAGTATAAAGAC
GACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCC
GATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAACCTCCAAAGGCAAATCCATCCCTATAG
GTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGCGTTATCTGGAC
GAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGGCAGGCGTCC
CGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCG
GCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (509-838)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.217	100	0.738