Detailed information NTG0735548

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P5670_RS14240
• Genome accession: NZ_CP121087
• Coordinates: 2906915..2907940 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ST3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2901915..2912940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5670_RS14220 (P5670_14220)	metJ	2903100..2903417 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
P5670_RS14225 (P5670_14225)	yiiX	2903477..2904085 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
P5670_RS14230 (P5670_14230)	rpmE	2904146..2904358 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
P5670_RS14235 (P5670_14235)	priA	2904561..2906759 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
P5670_RS14240 (P5670_14240)	cytR	2906915..2907940 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
P5670_RS14245 (P5670_14245)	ftsN	2908032..2908991 (+)	960	WP_000068844.1	cell division protein FtsN	-
P5670_RS14250 (P5670_14250)	hslV	2909084..2909614 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P5670_RS14255 (P5670_14255)	hslU	2909624..2910955 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
P5670_RS14260 (P5670_14260)	menA	2911022..2911948 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P5670_RS14265 (P5670_14265)	rraA	2912041..2912526 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=735548 P5670_RS14240 WP_000644904.1 2906915..2907940(+) (cytR) [Escherichia coli strain ST3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=735548 P5670_RS14240 WP_000644904.1 2906915..2907940(+) (cytR) [Escherichia coli strain ST3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628