Detailed information NTG0735401

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: OCL40_RS10270
• Genome accession: NZ_CP106803
• Coordinates: 1946021..1949116 (+)
• Length: 1031 a.a.
• NCBI ID: WP_263055836.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10819
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1941021..1954116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCL40_RS10250 (OCL40_10250)	-	1941714..1942163 (-)	450	WP_003688065.1	CopD family copper resistance protein	-
OCL40_RS10255 (OCL40_10255)	waaA	1942204..1943475 (-)	1272	WP_025455875.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
OCL40_RS10260 (OCL40_10260)	gnd	1943538..1944986 (-)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
OCL40_RS10265 (OCL40_10265)	-	1945066..1945329 (-)	264	WP_017147189.1	hypothetical protein	-
OCL40_RS10270 (OCL40_10270)	pilC	1946021..1949116 (+)	3096	WP_263055836.1	PilC family type IV pilus tip adhesin	Machinery gene
OCL40_RS10275 (OCL40_10275)	-	1949821..1950105 (+)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
OCL40_RS10280 (OCL40_10280)	yccS	1950781..1952931 (-)	2151	WP_003697785.1	YccS family putative transporter	-

Sequence

Protein

• Length: 1031 a.a.
• Molecular weight: 113238.58 Da
• Isoelectric Point: 9.8370

>NTDB_id=735401 OCL40_RS10270 WP_263055836.1 1946021..1949116(+) (pilC) [Neisseria gonorrhoeae strain 10819]
MNKTLKRQVFRHTALYAAILMFSHTGGGGAMAQTYKYAIVMNAQNQPEVRRNGQYSTIKGKDREREYTYHNTRGGGGSVS
FNNTDTLVSQQSGTAVFGTATYLPPYGKVSGFDADALKERNNAVDWIRTTRIALAGYSYADVICKSSNQCPQLVYETKFA
FGQQGLQRKGNKLDIYEDKSRDNSPIYKLKDYPWLGVSFNLGSENTVKNSKSFNKLISSFNEDNNNQTIVSTTRDHPISL
GNWQREHTAVAYYLNAKLHLLDKKRIEDIAQGKTVDLGTLRPRVETTGRGWLSFWAGWDIKDTGQIPVKLGLPQVKAGRC
INKLNPNKNTKAPSPALTAPALWFGPGQDGKVQMYSASVSTYPDSSSSRIYLQNLKRKTEHGKPGRYSLVTLNENDIKSR
QPNFMGRQTIIRLDDGVHLIKLNGSKDEVVAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGPGNDDKFK
SINQKPEKYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRKDIESK
DSTLAKELRTFAEKGYVGDRYGVDGGFVLRQVELRGQKHVFMFGAMGLGGRGAYALDLSKINGNYPAAAPLFDVKNGDNN
GKNRVELGYTVGTPQIGKIRNGKYAAFLASGYAAKKIDGPTNTTALSTNTTALYVYDLNDTLGTPIAKIEVEDGKGGLSS
PTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDNDPNKWTVRTIFQGTKPITSAPAVSRLKDKRVVIFGTGSDLTEDDVLNT
DEQYIYGIFDDDNRTVNVKVTNGTGGGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIR
SYTGNDKCGAQTAILGINTADGGALTPRSARPIVPDNQVAQYSGHQKMNGKSVPIGCMWKNGKTVCPNGYVYDKPVNVRY
LDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3096 bp

>NTDB_id=735401 OCL40_RS10270 WP_263055836.1 1946021..1949116(+) (pilC) [Neisseria gonorrhoeae strain 10819]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACGTATAAATACGCTATTGTGATGAACGCGCAAAACCAGCCCGAGGTACGGCGGAATGGGC
AATATTCAACAATAAAGGGCAAAGACAGGGAGCGCGAATATACTTATCATAACACACGAGGAGGAGGAGGCTCTGTCTCA
TTCAACAATACCGATACCCTTGTTTCCCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGG
CAAGGTTTCCGGTTTTGATGCCGACGCTCTGAAAGAGCGCAACAATGCCGTCGATTGGATTCGTACCACCCGCATCGCGC
TGGCAGGCTACAGCTACGCCGACGTCATATGCAAAAGCAGCAACCAATGCCCCCAACTTGTCTATGAGACCAAATTTGCC
TTCGGTCAACAAGGGTTGCAAAGAAAGGGCAACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCCCATTTA
CAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATAGCAAATCATTCA
ACAAATTGATATCTTCTTTTAATGAAGACAATAATAATCAAACCATCGTCTCTACGACACGAGACCACCCTATTTCCCTT
GGCAACTGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAAGGATTGA
AGATATCGCCCAAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAGGCTGGCTAAGTT
TTTGGGCTGGGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCCGCAAGTCAAAGCAGGCCGCTGC
ATCAACAAACTGAACCCCAATAAGAATACCAAAGCCCCTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGACCTGG
GCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGACAGTTCGAGCAGCCGCATCTACCTTCAAA
ATCTGAAAAGAAAAACCGAACACGGCAAACCCGGCCGCTATTCCCTCGTAACCTTGAATGAGAATGATATTAAAAGTCGA
CAGCCGAATTTCATGGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACTGAATGGAAGCAAGGA
TGAGGTCGTCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAGCGAACG
TCAATCTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGGTAATGACGATAAATTTAAA
TCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGAAAACGGCAATCGCGATTTGGGCGACATCGT
CAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATATCTTCAAAAAAAACG
GCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGTACGATGCCGCGCAAGGATATTGAAAGCAAA
GATTCTACACTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTT
TGTCTTGCGCCAAGTCGAACTGCGCGGGCAAAAACACGTGTTTATGTTCGGCGCGATGGGTTTGGGCGGCAGGGGCGCGT
ATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCTCCCCTGTTTGATGTCAAAAATGGCGATAATAAC
GGCAAAAATCGCGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAATCCGCAACGGCAAATACGCCGCCTT
CCTCGCCTCCGGTTATGCGGCTAAAAAAATTGACGGCCCAACAAATACAACCGCGCTGTCAACAAATACAACCGCGCTGT
ATGTATATGATTTGAACGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGGAGGACGGCAAGGGCGGGCTTTCGTCC
CCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGATCGGGGCGGGAATATGTACCGCTT
TGATTTGAGCGACAACGACCCGAACAAATGGACTGTACGCACTATTTTCCAAGGCACAAAACCGATTACTTCCGCGCCCG
CCGTTTCCCGACTGAAAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGACCGAAGATGATGTACTGAATACG
GACGAACAATATATTTACGGCATCTTCGACGACGATAATAGGACGGTTAATGTAAAGGTAACAAACGGCACGGGAGGCGG
GCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGATCGGGCAGTAAGGGGT
GGGTAGTAAAGCTGAAGGAAGGACAACGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTCACCATCCGC
AGCTATACGGGTAATGACAAATGCGGCGCGCAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCC
GAGAAGCGCGCGCCCGATTGTGCCGGATAACCAGGTTGCGCAATATTCCGGCCATCAGAAAATGAACGGCAAGTCCGTCC
CCATAGGCTGCATGTGGAAAAACGGCAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGCGTTAT
CTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGGCAG
GCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATA
TTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (503-842)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	75.5	100	0.768