Detailed information NTG0735293

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: LLUC7005_RS08875
• Genome accession: NZ_CP120933
• Coordinates: 1816231..1818009 (+)
• Length: 592 a.a.
• NCBI ID: WP_014570702.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain UC7005
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1811231..1823009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUC7005_RS08855 (LLUC7005_08825)	-	1811319..1812992 (-)	1674	WP_014570701.1	polysaccharide biosynthesis protein	-
LLUC7005_RS08860 (LLUC7005_08830)	-	1813202..1814653 (+)	1452	WP_003130330.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	-
LLUC7005_RS08865 (LLUC7005_08835)	-	1814732..1814992 (-)	261	WP_003130328.1	hypothetical protein	-
LLUC7005_RS08870 (LLUC7005_08840)	adhP	1815013..1816035 (-)	1023	WP_003130326.1	alcohol dehydrogenase AdhP	-
LLUC7005_RS08875 (LLUC7005_08845)	recQ	1816231..1818009 (+)	1779	WP_014570702.1	DNA helicase RecQ	Machinery gene
LLUC7005_RS08880 (LLUC7005_08850)	yjeM	1818045..1819571 (-)	1527	WP_003130322.1	glutamate/gamma-aminobutyrate family transporter YjeM	-
LLUC7005_RS08885 (LLUC7005_08855)	pepT	1819851..1821092 (-)	1242	WP_003130321.1	peptidase T	-
LLUC7005_RS08890 (LLUC7005_08860)	-	1821121..1821918 (-)	798	WP_010906148.1	DUF1803 domain-containing protein	-
LLUC7005_RS08895 (LLUC7005_08865)	-	1821918..1822862 (-)	945	WP_003130319.1	manganese-dependent inorganic pyrophosphatase	-

Sequence

Protein

• Length: 592 a.a.
• Molecular weight: 66974.82 Da
• Isoelectric Point: 6.4494

>NTDB_id=735293 LLUC7005_RS08875 WP_014570702.1 1816231..1818009(+) (recQ) [Lactococcus lactis subsp. lactis strain UC7005]
MNLEAKLKEIFGYDNFRNGQKQIIEQVLDGQATLGILPTGAGKSICYQLPALIQPGLTLVISPLISLMKDQVDQLNIAGI
PATFINSTLEDSESYQRMRQVENGEIKLLFVAPERFSLDYFNAFLQKLPIDLVAIDEAHCISQWGHDFRPSYVDFASHLQ
YLPTNPTVLALTATATPKVADDIQKLLSISPSHTIKTGFLRENLRFEVVKGMDKRTFLKNYLKNQESEAAGIIYASTRKE
VEEICEWLNHNHFKSVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRFVIHYALPATIESYYQEAGRAG
RDGLESDANLLFSPNDLRIRNFLIEQSEGDEAHKEHEYEKLRQMQAYTSSETCLQRYILQYFGDEGEDCKKCSNCLDERE
LLDITIDAQKVLSCVVRMGERFGKTAVAQVLIGSKNKNIAKWNFESLSTFGIMKNHSQKTVGELIDFLSAESYLNITSGK
FPLLLLSAQGLKVLKGQIKVYRKASLIIESKTKISHHFDEECFASIRALRLELAKEEGVPPFMIFSDSALKEMAQVLPDS
QSQFLQISGVGPVKLKKYGRLFIDKISEYKKS

Nucleotide

• Length: 1779 bp

>NTDB_id=735293 LLUC7005_RS08875 WP_014570702.1 1816231..1818009(+) (recQ) [Lactococcus lactis subsp. lactis strain UC7005]
ATGAATTTAGAAGCTAAATTAAAAGAAATTTTTGGTTATGACAATTTCCGAAATGGTCAGAAACAAATTATTGAACAAGT
CCTAGATGGACAAGCCACTCTTGGTATTTTACCCACAGGAGCTGGAAAATCAATCTGCTATCAGTTACCAGCTCTTATTC
AACCAGGGCTTACTCTCGTAATCTCCCCACTTATTAGCTTGATGAAAGATCAAGTCGACCAGCTGAATATTGCCGGAATT
CCAGCAACATTTATTAACTCTACCTTAGAGGATTCCGAATCTTATCAAAGAATGCGACAGGTTGAAAATGGCGAAATCAA
GCTTCTTTTTGTAGCACCAGAGCGTTTTTCATTAGACTATTTCAATGCCTTTTTACAAAAACTTCCAATTGATTTAGTTG
CCATAGACGAAGCACACTGCATTTCACAATGGGGGCACGATTTCAGACCCAGTTATGTCGATTTTGCCTCTCATCTCCAA
TATTTACCAACAAATCCTACCGTCTTAGCCCTTACGGCTACTGCGACACCAAAAGTTGCAGATGATATTCAAAAACTTCT
TTCAATTTCCCCCAGTCATACTATTAAAACCGGTTTTCTTAGAGAAAACTTACGTTTTGAAGTAGTCAAAGGGATGGATA
AGAGAACTTTTCTTAAAAATTATCTTAAAAATCAAGAAAGTGAGGCTGCTGGAATTATCTATGCCAGCACTCGTAAAGAA
GTTGAAGAAATTTGTGAATGGCTCAACCATAATCATTTCAAATCCGTTCGTTACCATGCTGGACTGAGCGAACAGGAACG
TCAAATAAATCAAGAACTTTTTCTCTTTGACGAAGTACCGATAATGGTTGCCACTAATGCTTTTGGCATGGGAATCAATA
AACCAAATGTTCGATTTGTGATTCATTATGCCCTTCCCGCAACAATTGAAAGTTATTATCAAGAAGCTGGGCGAGCAGGA
CGGGACGGGCTTGAATCTGATGCTAACCTCCTTTTTTCACCAAATGATTTACGAATTCGTAATTTCTTGATTGAGCAAAG
TGAAGGTGATGAAGCGCACAAGGAACATGAATACGAAAAGCTTCGACAAATGCAAGCATACACAAGTTCCGAAACCTGTT
TACAACGCTATATCTTGCAATATTTTGGTGATGAAGGTGAAGATTGTAAAAAATGTAGTAATTGTCTTGATGAAAGAGAG
CTTCTCGATATTACAATTGATGCTCAAAAAGTCCTATCTTGTGTCGTCCGAATGGGTGAACGTTTTGGTAAGACGGCCGT
AGCACAAGTTTTGATTGGTTCTAAAAATAAAAATATTGCCAAATGGAATTTTGAATCTCTATCGACTTTTGGAATTATGA
AAAACCATTCCCAAAAGACCGTGGGTGAATTAATCGATTTTCTATCTGCTGAAAGTTATTTAAACATTACATCAGGTAAA
TTCCCACTTCTCCTTCTTTCAGCCCAAGGATTAAAAGTCCTCAAAGGACAAATCAAAGTTTATCGCAAAGCTAGCCTAAT
TATTGAATCGAAAACAAAAATTTCTCATCATTTTGATGAAGAATGTTTTGCAAGTATTCGTGCACTTCGACTTGAACTAG
CCAAGGAAGAAGGCGTCCCTCCTTTCATGATTTTTTCTGATAGTGCCCTTAAAGAAATGGCTCAAGTTCTGCCGGATAGT
CAAAGTCAATTTTTACAAATTTCTGGTGTCGGACCTGTTAAACTCAAAAAATATGGAAGGCTTTTTATCGACAAAATATC
TGAATATAAAAAAAGCTGA

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (19-179)

• RecQ zinc-binding (RecQ_Zn_bind) (335-396)

• Helicase conserved C-terminal domain (Helicase_C) (214-322)

• HRDC domain (HRDC) (520-584)

• RQC domain (RQC) (399-503)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	51.107	99.155	0.507