Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | OEJ84_RS13970 | Genome accession | NZ_CP106791 |
| Coordinates | 2651981..2652391 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain 23-1 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2647347..2698837 | 2651981..2652391 | within | 0 |
Gene organization within MGE regions
Location: 2647347..2698837
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OEJ84_RS13945 (OEJ84_13945) | yqeF | 2647514..2648245 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| OEJ84_RS13950 (OEJ84_13950) | cwlH | 2648497..2649249 (-) | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| OEJ84_RS13955 (OEJ84_13955) | yqeD | 2649436..2650062 (+) | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| OEJ84_RS13960 (OEJ84_13960) | gnd | 2650081..2650974 (-) | 894 | WP_003229961.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| OEJ84_RS13965 (OEJ84_13965) | yqeB | 2651226..2651948 (+) | 723 | WP_010886572.1 | hypothetical protein | - |
| OEJ84_RS13970 (OEJ84_13970) | nucA/comI | 2651981..2652391 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| OEJ84_RS13975 (OEJ84_13975) | - | 2652587..2652937 (+) | 351 | Protein_2706 | sigma-70 family RNA polymerase sigma factor | - |
| OEJ84_RS13980 (OEJ84_13980) | spoIVCA | 2652965..2654425 (-) | 1461 | WP_223257626.1 | site-specific DNA recombinase SpoIVCA | - |
| OEJ84_RS13985 (OEJ84_13985) | - | 2654383..2654561 (-) | 179 | Protein_2708 | hypothetical protein | - |
| OEJ84_RS13990 (OEJ84_13990) | arsC | 2654916..2655335 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| OEJ84_RS13995 (OEJ84_13995) | acr3 | 2655347..2656387 (-) | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| OEJ84_RS14000 (OEJ84_14000) | arsK | 2656410..2656850 (-) | 441 | WP_003229954.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| OEJ84_RS14005 (OEJ84_14005) | arsR | 2656911..2657228 (-) | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| OEJ84_RS14010 (OEJ84_14010) | yqcI | 2657600..2658364 (-) | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| OEJ84_RS14015 (OEJ84_14015) | rapE | 2658807..2659934 (+) | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| OEJ84_RS14020 (OEJ84_14020) | phrE | 2659924..2660058 (+) | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| OEJ84_RS14025 (OEJ84_14025) | - | 2660168..2660326 (+) | 159 | WP_003245945.1 | hypothetical protein | - |
| OEJ84_RS14030 (OEJ84_14030) | yqcG | 2660696..2662291 (+) | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| OEJ84_RS14035 (OEJ84_14035) | yqcF | 2662306..2662884 (+) | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| OEJ84_RS14040 (OEJ84_14040) | - | 2663002..2663148 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| OEJ84_RS14045 (OEJ84_14045) | - | 2663145..2663507 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| OEJ84_RS14050 (OEJ84_14050) | - | 2663523..2664002 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
| OEJ84_RS14055 (OEJ84_14055) | cwlA | 2664167..2664985 (-) | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | - |
| OEJ84_RS14060 (OEJ84_14060) | skhD | 2665030..2665452 (-) | 423 | WP_003246208.1 | holin family protein | - |
| OEJ84_RS14065 (OEJ84_14065) | xepAK | 2665497..2666390 (-) | 894 | WP_003246010.1 | hypothetical protein | - |
| OEJ84_RS14070 (OEJ84_14070) | yqcE | 2666478..2666642 (-) | 165 | WP_003229944.1 | XkdX family protein | - |
| OEJ84_RS14075 (OEJ84_14075) | yqcD | 2666639..2666974 (-) | 336 | WP_009967793.1 | XkdW family protein | - |
| OEJ84_RS14080 (OEJ84_14080) | yqcC | 2666984..2668084 (-) | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| OEJ84_RS14085 (OEJ84_14085) | - | 2668087..2668359 (-) | 273 | WP_003229942.1 | hypothetical protein | - |
| OEJ84_RS14090 (OEJ84_14090) | yqcA | 2668356..2668934 (-) | 579 | WP_003229941.1 | YmfQ family protein | - |
| OEJ84_RS14095 (OEJ84_14095) | yqbT | 2668918..2669964 (-) | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| OEJ84_RS14100 (OEJ84_14100) | yqbS | 2669957..2670382 (-) | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| OEJ84_RS14105 (OEJ84_14105) | yqbR | 2670395..2670658 (-) | 264 | WP_003229938.1 | DUF2577 family protein | - |
| OEJ84_RS14110 (OEJ84_14110) | yqbQ | 2670655..2671635 (-) | 981 | WP_004398524.1 | hypothetical protein | - |
| OEJ84_RS14115 (OEJ84_14115) | yqbP | 2671648..2672307 (-) | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| OEJ84_RS14120 (OEJ84_14120) | yqbO | 2672300..2677057 (-) | 4758 | WP_003246092.1 | phage tail tape measure protein | - |
| OEJ84_RS14125 (OEJ84_14125) | - | 2677060..2677197 (-) | 138 | WP_003229934.1 | hypothetical protein | - |
| OEJ84_RS14130 (OEJ84_14130) | - | 2677239..2677688 (-) | 450 | WP_003229933.1 | phage tail assembly chaperone | - |
| OEJ84_RS14135 (OEJ84_14135) | txpA | 2677834..2678013 (+) | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | - |
| OEJ84_RS14140 (OEJ84_14140) | bsrH | 2678393..2678482 (+) | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| OEJ84_RS14145 (OEJ84_14145) | yqbM | 2678736..2679179 (-) | 444 | WP_003229930.1 | phage tail tube protein | - |
| OEJ84_RS14150 (OEJ84_14150) | yqbK | 2679182..2680582 (-) | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| OEJ84_RS14155 (OEJ84_14155) | - | 2680583..2680774 (-) | 192 | WP_010886574.1 | hypothetical protein | - |
| OEJ84_RS14160 (OEJ84_14160) | yqbJ | 2680771..2681208 (-) | 438 | WP_003229927.1 | DUF6838 family protein | - |
| OEJ84_RS14165 (OEJ84_14165) | yqbI | 2681221..2681724 (-) | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| OEJ84_RS14170 (OEJ84_14170) | yqbH | 2681721..2682083 (-) | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| OEJ84_RS14175 (OEJ84_14175) | gkpG | 2682080..2682475 (-) | 396 | WP_004398566.1 | DUF3199 family protein | - |
| OEJ84_RS14180 (OEJ84_14180) | yqbF | 2682479..2682790 (-) | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| OEJ84_RS14185 (OEJ84_14185) | skdG | 2682801..2683736 (-) | 936 | WP_003229922.1 | phage major capsid protein | - |
| OEJ84_RS14190 (OEJ84_14190) | yqbD | 2683755..2684723 (-) | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| OEJ84_RS14195 (OEJ84_14195) | - | 2684756..2685409 (-) | 654 | WP_003229920.1 | hypothetical protein | - |
| OEJ84_RS14200 (OEJ84_14200) | yqbB | 2685450..2686367 (-) | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| OEJ84_RS14205 (OEJ84_14205) | yqbA | 2686364..2687896 (-) | 1533 | WP_004398894.1 | phage portal protein | - |
| OEJ84_RS14210 (OEJ84_14210) | stmB | 2687900..2689195 (-) | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| OEJ84_RS14215 (OEJ84_14215) | terS | 2689188..2689907 (-) | 720 | WP_003229916.1 | phage terminase small subunit | - |
| OEJ84_RS14220 (OEJ84_14220) | - | 2689975..2690439 (-) | 465 | WP_004398685.1 | hypothetical protein | - |
| OEJ84_RS14225 (OEJ84_14225) | yqaQ | 2690583..2691038 (-) | 456 | WP_004398775.1 | hypothetical protein | - |
| OEJ84_RS14230 (OEJ84_14230) | - | 2691236..2692165 (+) | 930 | WP_003229913.1 | hypothetical protein | - |
| OEJ84_RS14235 (OEJ84_14235) | yqaO | 2692239..2692445 (-) | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| OEJ84_RS14240 (OEJ84_14240) | yqaN | 2692527..2692955 (-) | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OEJ84_RS14245 (OEJ84_14245) | - | 2693051..2693200 (-) | 150 | WP_003229910.1 | hypothetical protein | - |
| OEJ84_RS14250 (OEJ84_14250) | sknM | 2693191..2694132 (-) | 942 | WP_075058863.1 | ATP-binding protein | - |
| OEJ84_RS14255 (OEJ84_14255) | yqaL | 2694014..2694691 (-) | 678 | WP_010886575.1 | DnaD domain-containing protein | - |
| OEJ84_RS14260 (OEJ84_14260) | recT | 2694767..2695621 (-) | 855 | WP_003229907.1 | recombinase RecT | - |
| OEJ84_RS14265 (OEJ84_14265) | yqaJ | 2695624..2696583 (-) | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| OEJ84_RS14270 (OEJ84_14270) | yqaI | 2696689..2696883 (-) | 195 | WP_003229905.1 | YqaI family protein | - |
| OEJ84_RS14275 (OEJ84_14275) | - | 2696843..2697016 (-) | 174 | WP_119123069.1 | hypothetical protein | - |
| OEJ84_RS14280 (OEJ84_14280) | sknH | 2697013..2697270 (-) | 258 | WP_003245994.1 | YqaH family protein | - |
| OEJ84_RS14285 (OEJ84_14285) | yqaG | 2697267..2697836 (-) | 570 | WP_004398626.1 | helix-turn-helix domain-containing protein | - |
| OEJ84_RS14290 (OEJ84_14290) | - | 2697910..2698050 (-) | 141 | WP_003229902.1 | hypothetical protein | - |
| OEJ84_RS14295 (OEJ84_14295) | yqaF | 2698080..2698310 (-) | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| OEJ84_RS14300 (OEJ84_14300) | sknR | 2698487..2698837 (+) | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=735259 OEJ84_RS13970 WP_009967785.1 2651981..2652391(-) (nucA/comI) [Bacillus subtilis strain 23-1]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=735259 OEJ84_RS13970 WP_009967785.1 2651981..2652391(-) (nucA/comI) [Bacillus subtilis strain 23-1]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |