Detailed information NTG0735006

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: LLE29_RS10245
• Genome accession: NZ_CP106780
• Coordinates: 1949389..1952349 (-)
• Length: 986 a.a.
• NCBI ID: WP_311201893.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10794
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1944389..1957349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLE29_RS10235 (LLE29_10235)	yccS	1945536..1947716 (+)	2181	WP_229930421.1	YccS family putative transporter	-
LLE29_RS10240 (LLE29_10240)	-	1948198..1948482 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
LLE29_RS10245 (LLE29_10245)	pilC	1949389..1952349 (-)	2961	WP_311201893.1	PilC family type IV pilus tip adhesin	Machinery gene
LLE29_RS11880	pilC	1952349..1952477 (-)	129	WP_263071070.1	hypothetical protein	Machinery gene
LLE29_RS10250 (LLE29_10250)	-	1953164..1953427 (+)	264	WP_229433460.1	hypothetical protein	-
LLE29_RS10255 (LLE29_10255)	gnd	1953507..1954955 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
LLE29_RS10260 (LLE29_10260)	waaA	1955018..1956289 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
LLE29_RS10265 (LLE29_10265)	-	1956330..1956779 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 986 a.a.
• Molecular weight: 108162.85 Da
• Isoelectric Point: 9.7848

>NTDB_id=735006 LLE29_RS10245 WP_311201893.1 1949389..1952349(-) (pilC) [Neisseria gonorrhoeae strain 10794]
MNAQNQPEVKSNVPYSIKDKDRKRVFDYTSQKSSLGRTNNFISFNNNDEVVARKNGTAVFGTATYLPPYGKVSGFDADAL
KERANAVDWIRTTRPGLAGYAYTDVICRDAGQCPQLVYETKFAFGQQGLQRNGNKLDIYEDKSRDNSPIYKLKDYPWLGV
SFNLGSENTVKNGRSSGRLISSFSENNNNQTIVSTTRDRPISLGDRQREHTAVAYYLNAKLHLLDKKRIKDIAQGKTVDL
GTLRPRVETTGRNWLSYWATWKIEDKGNITVRLGLPEVKAGRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSAS
VSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGEIKSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVVAFVNLNGN
NTGKNDTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGY
LATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMPRKDIESNDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFM
FGAMGLGGRGAYALDLSKTNGNYPAAASLFDVKDGDKKGKNRVEVELGYTVGTPQIGKTQNGTYSAFLASGYAAKQIDDS
TNKTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTK
PITSAPAVSRLADKRVVIFGTGSDLSEQDVVDKDQQYIYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSD
GSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGCGADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHK
TTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLL
MNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 2961 bp

>NTDB_id=735006 LLE29_RS10245 WP_311201893.1 1949389..1952349(-) (pilC) [Neisseria gonorrhoeae strain 10794]
ATGAACGCGCAAAACCAGCCCGAGGTAAAGTCGAATGTGCCATATTCAATAAAGGACAAAGACAGGAAGCGGGTATTTGA
CTATACGAGCCAGAAAAGCAGCTTAGGCAGGACAAACAATTTTATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAA
AAAACGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTG
AAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGGCCCGGGCTGGCAGGCTACGCCTACACCGACGTCATATG
CAGAGACGCAGGGCAATGCCCCCAACTTGTCTATGAGACCAAATTTGCCTTCGGTCAACAAGGGTTGCAAAGAAATGGCA
ACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTA
TCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATGGCAGATCATCCGGCAGATTGATATCTTCTTTTAGTGAAAACAA
TAATAATCAAACCATCGTCTCTACGACACGAGACCGCCCTATTTCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGG
CCTATTATCTGAACGCCAAGCTGCACCTGCTGGACAAAAAAAGGATTAAAGATATCGCCCAAGGCAAAACAGTGGATTTG
GGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAAACTGGCTAAGTTATTGGGCTACGTGGAAGATTGAAGATAAAGG
GAACATTACAGTCCGCCTCGGCCTGCCGGAAGTCAAAGCAGGCCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAG
CCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCG
GTTTCTACCTACCCCGACAGTTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGG
CCGCTATTCCCTCAAATCTTTGAATGATGGTGAGATTAAAAGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCC
GATTGGATGACGGCGTACATTTGATCAAACTGAATGGAAGCAAGGATGAGGTCGTCGCTTTTGTCAATTTAAATGGAAAC
AACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCTGACGAGTGGAAAAAAGTGCT
GCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAA
GATACCGCATCCGCGACAACAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTAT
CTGGCAACTTCTGCCAACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCT
CAGCTACATCCCGGGTACGATGCCGCGCAAGGATATTGAAAGCAACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTG
CCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATG
TTCGGCGCGATGGGTTTGGGCGGCAGGGGCGCGTATGCCTTGGATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGC
TTCCCTGTTTGATGTCAAAGATGGCGATAAGAAAGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGC
CGCAAATCGGCAAAACCCAAAACGGCACATACTCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAACAAATTGACGACTCA
ACAAATAAAACCGCGCTGTATGTGTATGATTTGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGG
CAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGG
GCGGCAATATGTACCGCTTTGATTTGAGCGGCGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAA
CCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGA
ACAGGATGTAGTCGATAAGGATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTAC
AAAACGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGAC
GGATCGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTAC
CGCCTTCGTAACCATCCGCAAGTATAAAGACGACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACG
GCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAG
ACAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTA
CGACAAGCCGGTTAATGTGCGTTATCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGCGATGCGGGCG
GCAGCGGTATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTG
ATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTG
A

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (466-795)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.52	100	0.741