Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P4831_RS10865 Genome accession   NZ_CP120842
Coordinates   2129536..2130306 (-) Length   256 a.a.
NCBI ID   WP_004254655.1    Uniprot ID   Q9CE51
Organism   Lactococcus lactis strain ZFM559     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2124536..2135306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4831_RS10840 - 2125613..2125777 (+) 165 WP_010905061.1 bacteriocin -
  P4831_RS10845 - 2125900..2126205 (+) 306 WP_012898670.1 bacteriocin immunity protein -
  P4831_RS10850 - 2126465..2127646 (+) 1182 WP_047686102.1 site-specific integrase -
  P4831_RS10855 - 2127858..2128484 (+) 627 WP_004254657.1 copper homeostasis protein CutC -
  P4831_RS10860 - 2128524..2129543 (-) 1020 WP_004254656.1 ABC transporter permease -
  P4831_RS10865 pptA 2129536..2130306 (-) 771 WP_004254655.1 ABC transporter ATP-binding protein Regulator
  P4831_RS10870 - 2130325..2132079 (-) 1755 WP_277812475.1 glycerophosphodiester phosphodiesterase -
  P4831_RS10875 - 2132408..2132809 (+) 402 WP_004254651.1 HIT family protein -
  P4831_RS10880 - 2132822..2133043 (+) 222 WP_010906257.1 hypothetical protein -
  P4831_RS10885 - 2133055..2133399 (-) 345 WP_047686108.1 hypothetical protein -
  P4831_RS10890 rplA 2133478..2134167 (-) 690 WP_004254644.1 50S ribosomal protein L1 -
  P4831_RS10895 rplK 2134463..2134888 (-) 426 WP_004254643.1 50S ribosomal protein L11 -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 28472.99 Da        Isoelectric Point: 4.5320

>NTDB_id=734516 P4831_RS10865 WP_004254655.1 2129536..2130306(-) (pptA) [Lactococcus lactis strain ZFM559]
MLKVTNLTGGYLGHPVLKDLNFEIKEGELVGLIGLNGAGKSTTIQEIIGLLTPYSGQIELDGLTLQQDLEGYRRKIGFIP
ETPSLYEELTLREHIEVTALAYGISVDLAFERAEKLLETFRLSDKLDWFPVNFSKGMKQKVMIICAFLVEPSLYIVDEPF
MGLDPLAIQDLIDLMIDMKKSGSSILMSTHILSTAEKFCDKFIVLHEGQVVAFGTVEELRTQFNQPKASLDEIYLALTKG
NIPNSKEVVEAGKSNE

Nucleotide


Download         Length: 771 bp        

>NTDB_id=734516 P4831_RS10865 WP_004254655.1 2129536..2130306(-) (pptA) [Lactococcus lactis strain ZFM559]
ATGTTAAAAGTAACAAATCTAACAGGTGGCTATTTGGGGCATCCTGTCTTAAAAGACCTTAATTTTGAAATTAAAGAAGG
AGAGTTAGTTGGACTCATTGGTTTAAATGGTGCAGGAAAATCGACGACAATTCAAGAAATTATTGGACTTTTGACTCCTT
ATTCTGGACAAATTGAATTAGACGGCTTAACTTTACAACAAGATTTAGAAGGCTATCGTAGAAAAATTGGTTTCATTCCA
GAAACACCAAGTTTGTATGAAGAATTGACTTTGCGTGAACATATTGAAGTGACAGCTTTAGCTTACGGGATTTCTGTTGA
CTTGGCTTTTGAACGTGCTGAAAAATTATTAGAAACTTTCCGCTTGAGTGATAAATTAGATTGGTTCCCTGTGAATTTTT
CAAAAGGGATGAAACAAAAAGTGATGATTATCTGCGCATTCTTAGTGGAACCTTCTCTCTATATTGTTGATGAACCTTTT
ATGGGACTTGATCCGCTTGCGATTCAGGATTTGATTGACTTGATGATTGACATGAAAAAATCAGGAAGTTCGATTTTAAT
GAGTACACATATCTTGTCCACAGCTGAAAAATTCTGTGATAAATTTATTGTTTTGCATGAAGGTCAAGTTGTTGCTTTTG
GAACAGTAGAAGAATTACGGACTCAATTTAATCAGCCTAAGGCAAGTTTAGATGAAATTTATCTTGCCTTAACAAAAGGA
AATATTCCAAACTCTAAAGAAGTTGTAGAGGCAGGAAAGTCAAATGAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CE51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

67.355

94.531

0.637
  pptA Streptococcus thermophilus LMD-9

66.942

94.531

0.633