Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N8I74_RS19420 Genome accession   NZ_CP106753
Coordinates   378021..378407 (-) Length   128 a.a.
NCBI ID   WP_263126703.1    Uniprot ID   -
Organism   Chitiniphilus purpureus strain CD1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 373021..383407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8I74_RS01595 (N8I74_01595) - 374818..376971 (-) 2154 WP_263125171.1 methyl-accepting chemotaxis protein -
  N8I74_RS01600 (N8I74_01600) - 377059..377571 (-) 513 WP_263125172.1 chemotaxis protein CheW -
  N8I74_RS01605 (N8I74_01605) - 377603..377962 (-) 360 WP_408611912.1 response regulator transcription factor -
  N8I74_RS19420 (N8I74_01610) pilG 378021..378407 (-) 387 WP_263126703.1 twitching motility response regulator PilG Regulator
  N8I74_RS01615 (N8I74_01615) - 378705..379763 (-) 1059 WP_263125174.1 acyltransferase -
  N8I74_RS01620 (N8I74_01620) - 380020..380403 (+) 384 WP_263125175.1 MerR family DNA-binding protein -
  N8I74_RS01625 (N8I74_01625) - 380462..381037 (+) 576 WP_263125176.1 NAD(P)H-dependent oxidoreductase -
  N8I74_RS01630 (N8I74_01630) - 381104..381859 (+) 756 WP_263125177.1 copper homeostasis protein CutC -
  N8I74_RS01635 (N8I74_01635) ilvA 381875..383395 (-) 1521 WP_263125178.1 threonine ammonia-lyase, biosynthetic -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 13977.15 Da        Isoelectric Point: 5.7125

>NTDB_id=734487 N8I74_RS19420 WP_263126703.1 378021..378407(-) (pilG) [Chitiniphilus purpureus strain CD1]
MSNLAGIKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKISDHQPDVVFVDVMMPRLDGYQTCSLIKKNPRYKS
TPVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLAAVDAHVLPAG

Nucleotide


Download         Length: 387 bp        

>NTDB_id=734487 N8I74_RS19420 WP_263126703.1 378021..378407(-) (pilG) [Chitiniphilus purpureus strain CD1]
ATGTCGAATCTCGCCGGGATCAAGGTGATGGTCATCGACGACAGCAACACCATACGCCGCAGCGCGGAGATCTTCCTGGG
TCAGGCGGGATGCGAGGTGATCCTCGCCGAAGACGGTTTCGATGCGCTGGCCAAGATCAGCGACCATCAGCCGGACGTGG
TGTTTGTCGACGTGATGATGCCGCGCCTTGATGGTTATCAGACCTGCTCGCTGATCAAGAAGAACCCGCGCTACAAATCC
ACGCCGGTGATCATGCTGTCGTCCAAGGACGGCCTTTTTGATCGTGCCCGCGGTCGCATGGTCGGCTCGGACGAATACCT
CACCAAACCCTTCACCAAGGACAGCCTGCTTGCCGCCGTGGACGCCCACGTGCTGCCAGCCGGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.595

94.531

0.648