Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   P4831_RS02200 Genome accession   NZ_CP120842
Coordinates   415558..416340 (+) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis strain ZFM559     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 410558..421340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4831_RS02175 vicX 410581..411393 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  P4831_RS02180 vicK 411564..413006 (-) 1443 WP_010905315.1 cell wall metabolism sensor histidine kinase WalK Regulator
  P4831_RS02185 yycF 412999..413700 (-) 702 WP_003131580.1 response regulator YycF -
  P4831_RS02190 tmk 413878..414513 (+) 636 WP_012897230.1 dTMP kinase -
  P4831_RS02195 - 414646..415506 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  P4831_RS02200 yaaT 415558..416340 (+) 783 WP_010905316.1 stage 0 sporulation family protein Regulator
  P4831_RS02205 yabA 416333..416659 (+) 327 WP_003131570.1 DNA replication initiation control protein YabA -
  P4831_RS02210 rsmI 416659..417534 (+) 876 WP_010905318.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  P4831_RS02215 - 417611..417802 (-) 192 WP_003131566.1 hypothetical protein -
  P4831_RS02220 - 418130..418777 (-) 648 WP_046780917.1 hypothetical protein -
  P4831_RS02225 - 419626..419958 (-) 333 WP_129300062.1 hypothetical protein -
  P4831_RS02230 - 419958..420269 (-) 312 WP_039114619.1 hypothetical protein -
  P4831_RS02235 - 420519..421091 (-) 573 WP_023163758.1 hypothetical protein -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=734469 P4831_RS02200 WP_010905316.1 415558..416340(+) (yaaT) [Lactococcus lactis strain ZFM559]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=734469 P4831_RS02200 WP_010905316.1 415558..416340(+) (yaaT) [Lactococcus lactis strain ZFM559]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388