Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NDM80_RS05490 Genome accession   NZ_CP106749
Coordinates   1057634..1058095 (+) Length   153 a.a.
NCBI ID   WP_003688187.1    Uniprot ID   A0AA44U815
Organism   Neisseria gonorrhoeae strain 10723     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1052634..1063095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDM80_RS05455 (NDM80_05455) - 1052667..1053881 (-) 1215 WP_003690983.1 pyridoxal phosphate-dependent aminotransferase -
  NDM80_RS05460 (NDM80_05460) - 1053970..1054179 (-) 210 WP_003688192.1 4-oxalocrotonate tautomerase family protein -
  NDM80_RS05465 (NDM80_05465) - 1054371..1055177 (+) 807 WP_003688191.1 DUF4198 domain-containing protein -
  NDM80_RS11810 - 1055237..1056456 (-) 1220 Protein_1066 Glu/Leu/Phe/Val dehydrogenase -
  NDM80_RS05485 (NDM80_05485) - 1056851..1057561 (+) 711 WP_003690977.1 phosphoglycolate phosphatase -
  NDM80_RS05490 (NDM80_05490) recX 1057634..1058095 (+) 462 WP_003688187.1 recombination regulator RecX Regulator
  NDM80_RS05495 (NDM80_05495) - 1058169..1058330 (+) 162 WP_010358395.1 hypothetical protein -
  NDM80_RS05500 (NDM80_05500) - 1058483..1058965 (+) 483 WP_003688183.1 acyl-CoA thioesterase -
  NDM80_RS05505 (NDM80_05505) - 1059363..1060376 (-) 1014 WP_025456184.1 peptidoglycan DD-metalloendopeptidase family protein -
  NDM80_RS05510 (NDM80_05510) surE 1060478..1061224 (-) 747 WP_003690973.1 5'/3'-nucleotidase SurE -
  NDM80_RS05515 (NDM80_05515) - 1061241..1062797 (-) 1557 WP_134994006.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17745.13 Da        Isoelectric Point: 10.4361

>NTDB_id=734385 NDM80_RS05490 WP_003688187.1 1057634..1058095(+) (recX) [Neisseria gonorrhoeae strain 10723]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEKTSRNLLPDRSSEKQAAIAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=734385 NDM80_RS05490 WP_003688187.1 1057634..1058095(+) (recX) [Neisseria gonorrhoeae strain 10723]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAAAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAGCAAGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCAACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACAGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

100

100

1