Detailed information NTG0734206

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N7220_RS10005
• Genome accession: NZ_CP106736
• Coordinates: 2179802..2180914 (-)
• Length: 370 a.a.
• NCBI ID: WP_283151310.1
• Uniprot ID: -
• Organism: Silvimonas soli strain 17-6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2174802..2185914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7220_RS09985	-	2175915..2177045 (+)	1131	WP_283151306.1	M14-type cytosolic carboxypeptidase	-
N7220_RS09990	rpoH	2177126..2177980 (-)	855	WP_283151307.1	RNA polymerase sigma factor RpoH	-
N7220_RS09995	ftsX	2178178..2179083 (-)	906	WP_283151308.1	permease-like cell division protein FtsX	-
N7220_RS10000	ftsE	2179096..2179749 (-)	654	WP_283151309.1	cell division ATP-binding protein FtsE	-
N7220_RS10005	pilA	2179802..2180914 (-)	1113	WP_283151310.1	signal recognition particle-docking protein FtsY	Machinery gene
N7220_RS10010	rsmD	2180983..2181531 (+)	549	WP_283151311.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
N7220_RS10015	-	2181568..2181891 (+)	324	WP_283151312.1	excalibur calcium-binding domain-containing protein	-
N7220_RS10020	-	2182007..2182258 (+)	252	WP_283151313.1	YfhL family 4Fe-4S dicluster ferredoxin	-
N7220_RS10025	queC	2182352..2183053 (-)	702	WP_283151314.1	7-cyano-7-deazaguanine synthase QueC	-
N7220_RS10030	-	2183059..2184408 (-)	1350	WP_283151315.1	chloride channel protein	-
N7220_RS10035	queE	2184419..2185072 (-)	654	WP_283151316.1	7-carboxy-7-deazaguanine synthase QueE	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 39535.65 Da
• Isoelectric Point: 4.9422

>NTDB_id=734206 N7220_RS10005 WP_283151310.1 2179802..2180914(-) (pilA) [Silvimonas soli strain 17-6]
MFDFFRKKPKTDPTTPVAEPVSTPLEPVEPPATAPVDVVIAPEAIVAVEVPVPAPAPELPQPQPQEKPKMSWAERLKAGL
AKTRDSLGKNLAGLFGGGQIDEELYEELETVLLTADMGVEATNTLLKDVRDRVSLRGLKDASELRQALKEALLELIQPLE
QPLVITPQKPFILMVAGVNGAGKTTSIGKLAKYFQGQGHSVLLAAGDTFRAAAREQLVVWGERNGVQVISQASGDAAAVA
FDAVNAARARQCDVIIVDTAGRLPTQLNLMEEIKKVKRVVQKADPTGPHEIMLVIDANTGQNAVSQVKAFDDALGLTGLV
LTKLDGTAKGGVIAAIAKQRPVPIRFIGVGETIDDLRPFVAKDYVDALFD

Nucleotide

• Length: 1113 bp

>NTDB_id=734206 N7220_RS10005 WP_283151310.1 2179802..2180914(-) (pilA) [Silvimonas soli strain 17-6]
ATGTTCGATTTTTTCCGCAAGAAACCCAAAACCGACCCGACAACACCTGTTGCCGAACCGGTATCCACGCCGCTTGAGCC
CGTCGAGCCGCCTGCTACGGCGCCAGTTGACGTTGTCATCGCCCCGGAAGCCATTGTAGCGGTCGAAGTGCCTGTTCCGG
CACCGGCACCGGAACTGCCGCAACCGCAACCGCAAGAAAAGCCCAAAATGTCTTGGGCAGAGCGGCTGAAGGCCGGTCTG
GCCAAAACCCGGGATTCGCTGGGCAAGAATCTGGCTGGCTTGTTTGGCGGCGGCCAGATCGATGAAGAGTTGTATGAAGA
ACTGGAAACCGTGTTGCTTACCGCCGATATGGGCGTGGAGGCTACCAATACGCTGCTGAAAGATGTGCGCGACCGGGTGT
CGCTGCGTGGCCTGAAAGACGCTTCCGAATTGCGCCAGGCGCTGAAAGAAGCGTTGCTTGAACTGATTCAGCCGCTGGAA
CAGCCGCTGGTTATCACTCCGCAAAAACCTTTTATCTTGATGGTTGCCGGTGTTAACGGCGCCGGTAAAACCACCAGCAT
CGGCAAACTGGCCAAGTACTTCCAGGGCCAGGGCCATAGTGTGCTGCTGGCGGCCGGTGATACCTTCCGCGCTGCGGCAC
GCGAACAACTGGTGGTCTGGGGCGAGCGCAATGGCGTGCAGGTGATCTCCCAGGCATCCGGCGATGCCGCAGCGGTGGCG
TTCGATGCGGTCAACGCCGCCCGCGCCCGCCAGTGTGATGTGATCATTGTCGATACCGCCGGCCGCCTGCCGACTCAGCT
GAACCTGATGGAAGAAATCAAAAAGGTGAAGCGTGTGGTGCAAAAAGCAGACCCGACTGGTCCGCATGAAATCATGTTGG
TGATCGACGCCAATACCGGCCAGAATGCAGTCAGCCAGGTCAAAGCCTTTGACGATGCGCTGGGCCTGACGGGGCTGGTG
CTGACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGATTGCGGCGATTGCCAAGCAACGGCCAGTGCCGATCCGCTTTAT
TGGTGTAGGTGAAACCATCGACGATCTGCGCCCGTTTGTGGCGAAGGATTATGTTGATGCGTTGTTTGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (87-152)

• SRP54-type protein, GTPase domain (SRP54) (171-369)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.95	100	0.668