Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   N7988_RS05990 Genome accession   NZ_CP106675
Coordinates   1162855..1163031 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain SRCM116293     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1157855..1168031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7988_RS05970 (N7988_05970) clpC 1158186..1160786 (+) 2601 WP_065704596.1 ATP-dependent chaperone ClpB Regulator
  N7988_RS05975 (N7988_05975) - 1160825..1161007 (-) 183 WP_001211116.1 YjzD family protein -
  N7988_RS05980 (N7988_05980) - 1161164..1161898 (+) 735 WP_000028691.1 hydrolase -
  N7988_RS05985 (N7988_05985) - 1161928..1162800 (+) 873 WP_065704594.1 NAD(P)-dependent oxidoreductase -
  N7988_RS05990 (N7988_05990) comZ 1162855..1163031 (+) 177 WP_001986215.1 ComZ family protein Regulator
  N7988_RS05995 (N7988_05995) fabH 1163569..1164501 (+) 933 WP_001100532.1 beta-ketoacyl-ACP synthase III -
  N7988_RS06000 (N7988_06000) fabF 1164533..1165771 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  N7988_RS06005 (N7988_06005) - 1165878..1166666 (+) 789 WP_000513275.1 DUF2268 domain-containing putative Zn-dependent protease -
  N7988_RS06010 (N7988_06010) - 1166810..1167556 (+) 747 WP_000966128.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=734021 N7988_RS05990 WP_001986215.1 1162855..1163031(+) (comZ) [Bacillus cereus strain SRCM116293]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=734021 N7988_RS05990 WP_001986215.1 1162855..1163031(+) (comZ) [Bacillus cereus strain SRCM116293]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586