Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   N7985_RS07645 Genome accession   NZ_CP106673
Coordinates   1459529..1459993 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM116268     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1454529..1464993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7985_RS07625 (N7985_07625) kinA 1454996..1456816 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  N7985_RS07630 (N7985_07630) dapX 1456826..1458007 (-) 1182 WP_041850887.1 aminotransferase A -
  N7985_RS07635 (N7985_07635) - 1458209..1458370 (-) 162 WP_014476654.1 hypothetical protein -
  N7985_RS07640 (N7985_07640) cheV 1458574..1459485 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  N7985_RS07645 (N7985_07645) kre 1459529..1459993 (-) 465 WP_003232406.1 YkyB family protein Regulator
  N7985_RS07650 (N7985_07650) ykuC 1460119..1461411 (-) 1293 WP_014479656.1 MFS transporter -
  N7985_RS07655 (N7985_07655) ltdD 1461487..1461981 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  N7985_RS07660 (N7985_07660) ppeE 1462038..1462898 (-) 861 WP_041850886.1 metallophosphoesterase -
  N7985_RS07665 (N7985_07665) fadH 1463041..1463805 (+) 765 WP_041850885.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=733957 N7985_RS07645 WP_003232406.1 1459529..1459993(-) (kre) [Bacillus subtilis strain SRCM116268]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=733957 N7985_RS07645 WP_003232406.1 1459529..1459993(-) (kre) [Bacillus subtilis strain SRCM116268]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1