Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P5655_RS18880 Genome accession   NZ_CP120681
Coordinates   3513619..3514413 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain DSM 10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3508619..3519413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5655_RS18855 (P5655_18855) rocD 3509069..3510274 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  P5655_RS18860 (P5655_18860) rocR 3510515..3511900 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  P5655_RS18865 (P5655_18865) - 3511882..3512070 (-) 189 Protein_3614 ATP-binding protein -
  P5655_RS18870 (P5655_18870) - 3512187..3512315 (-) 129 WP_003242634.1 hypothetical protein -
  P5655_RS18875 (P5655_18875) htrA 3512335..3513537 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  P5655_RS18880 (P5655_18880) vicX 3513619..3514413 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  P5655_RS18885 (P5655_18885) walI 3514435..3515277 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  P5655_RS18890 (P5655_18890) walH 3515264..3516631 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  P5655_RS18895 (P5655_18895) walK 3516621..3518456 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  P5655_RS18900 (P5655_18900) walR 3518464..3519171 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=733920 P5655_RS18880 WP_003242676.1 3513619..3514413(-) (vicX) [Bacillus subtilis strain DSM 10]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=733920 P5655_RS18880 WP_003242676.1 3513619..3514413(-) (vicX) [Bacillus subtilis strain DSM 10]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53