Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   N7980_RS16525 Genome accession   NZ_CP106671
Coordinates   3189143..3189937 (-) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM116301     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3184143..3194937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7980_RS16490 (N7980_16490) ephM 3184986..3185846 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  N7980_RS16495 (N7980_16495) spdL 3185833..3186165 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  N7980_RS16500 (N7980_16500) yfhK 3186250..3186768 (-) 519 WP_015252515.1 SH3 domain-containing protein -
  N7980_RS16505 (N7980_16505) yfhJ 3186913..3187182 (-) 270 WP_003243789.1 YfhJ family protein -
  N7980_RS16510 (N7980_16510) sspK 3187307..3187459 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  N7980_RS16515 (N7980_16515) yfhI 3187491..3188684 (-) 1194 WP_003243500.1 MFS transporter -
  N7980_RS16520 (N7980_16520) yfhH 3188827..3189141 (-) 315 WP_003244592.1 YfhH family protein -
  N7980_RS16525 (N7980_16525) recX 3189143..3189937 (-) 795 WP_029726844.1 recombination regulator RecX Regulator
  N7980_RS16530 (N7980_16530) yfhF 3190026..3190937 (+) 912 WP_041851148.1 TIGR01777 family oxidoreductase -
  N7980_RS16535 (N7980_16535) yfhE 3190992..3191102 (+) 111 WP_003223230.1 YfhE family protein -
  N7980_RS16540 (N7980_16540) yfhD 3191169..3191360 (+) 192 WP_041851149.1 YfhD family protein -
  N7980_RS16545 (N7980_16545) yfhC 3191399..3191983 (-) 585 WP_015252518.1 NAD(P)H nitroreductase -
  N7980_RS16550 (N7980_16550) yfhB 3192071..3192952 (-) 882 WP_041851150.1 PhzF family phenazine biosynthesis isomerase -
  N7980_RS16555 (N7980_16555) sxzA 3193067..3194098 (-) 1032 WP_003233568.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=733914 N7980_RS16525 WP_029726844.1 3189143..3189937(-) (recX) [Bacillus subtilis strain SRCM116301]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=733914 N7980_RS16525 WP_029726844.1 3189143..3189937(-) (recX) [Bacillus subtilis strain SRCM116301]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996