Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   N7980_RS14865 Genome accession   NZ_CP106671
Coordinates   2883388..2884509 (-) Length   373 a.a.
NCBI ID   WP_231573536.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM116301     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2878388..2889509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7980_RS14840 (N7980_14840) cwlQ 2878526..2879260 (+) 735 WP_041850976.1 bifunctional muramidase/murein lytic transglycosylase -
  N7980_RS14845 (N7980_14845) bhbI 2879515..2879913 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  N7980_RS14850 (N7980_14850) spxH 2879910..2880809 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  N7980_RS14855 (N7980_14855) - 2881124..2881291 (+) 168 WP_003244944.1 hypothetical protein -
  N7980_RS14860 (N7980_14860) pepF 2881329..2883158 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  N7980_RS14865 (N7980_14865) coiA 2883388..2884509 (-) 1122 WP_231573536.1 competence protein CoiA Machinery gene
  N7980_RS14870 (N7980_14870) - 2884583..2884705 (+) 123 WP_003245684.1 hypothetical protein -
  N7980_RS14875 (N7980_14875) mecA 2884700..2885356 (-) 657 WP_003232942.1 adaptor protein MecA Regulator
  N7980_RS14880 (N7980_14880) - 2885323..2885463 (-) 141 WP_119122854.1 hypothetical protein -
  N7980_RS14885 (N7980_14885) yjbE 2885632..2886288 (+) 657 WP_003232944.1 TerC family protein -
  N7980_RS14890 (N7980_14890) spx 2886331..2886726 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  N7980_RS14895 (N7980_14895) yjbC 2886907..2887485 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  N7980_RS14900 (N7980_14900) yjbB 2887650..2888867 (-) 1218 WP_128472215.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43853.87 Da        Isoelectric Point: 10.0622

>NTDB_id=733901 N7980_RS14865 WP_231573536.1 2883388..2884509(-) (coiA) [Bacillus subtilis strain SRCM116301]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTESFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=733901 N7980_RS14865 WP_231573536.1 2883388..2884509(-) (coiA) [Bacillus subtilis strain SRCM116301]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGAGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGAGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAAGGATTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

100

0.989