Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   N7980_RS13365 Genome accession   NZ_CP106671
Coordinates   2617394..2617978 (-) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain SRCM116301     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2612394..2622978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7980_RS13340 (N7980_13340) mobB 2612790..2613311 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  N7980_RS13345 (N7980_13345) glp 2613272..2614564 (-) 1293 WP_041850879.1 gephyrin-like molybdotransferase Glp -
  N7980_RS13350 (N7980_13350) moeB 2614582..2615601 (-) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  N7980_RS13355 (N7980_13355) mobA 2615652..2616251 (-) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  N7980_RS13360 (N7980_13360) cse15 2616388..2617353 (+) 966 WP_041850880.1 spore protein Cse15 -
  N7980_RS13365 (N7980_13365) rok 2617394..2617978 (-) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  N7980_RS13370 (N7980_13370) ykuV 2618444..2618890 (-) 447 WP_041850881.1 thiol-disulfide oxidoreductase YkuV -
  N7980_RS13375 (N7980_13375) ahpA 2618960..2619502 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  N7980_RS13380 (N7980_13380) mscT 2619739..2620542 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  N7980_RS13385 (N7980_13385) ykuS 2620579..2620824 (-) 246 WP_003232382.1 YkuS family protein -
  N7980_RS13390 (N7980_13390) dapI 2620886..2622010 (-) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  N7980_RS13395 (N7980_13395) dapD 2622080..2622790 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=733896 N7980_RS13365 WP_014113628.1 2617394..2617978(-) (rok) [Bacillus subtilis strain SRCM116301]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=733896 N7980_RS13365 WP_014113628.1 2617394..2617978(-) (rok) [Bacillus subtilis strain SRCM116301]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974