Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   P3L36_RS07405 Genome accession   NZ_CP120654
Coordinates   1449852..1450292 (-) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain Guangzhou-SAG036     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1444852..1455292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L36_RS07390 (P3L36_07390) - 1445510..1446136 (-) 627 WP_000449644.1 GTP pyrophosphokinase -
  P3L36_RS07395 (P3L36_07395) rcrQ 1446244..1447998 (-) 1755 WP_071661608.1 ABC transporter ATP-binding protein Regulator
  P3L36_RS07400 (P3L36_07400) rcrP 1447988..1449805 (-) 1818 WP_000481812.1 ABC transporter ATP-binding protein Regulator
  P3L36_RS07405 (P3L36_07405) rcrR 1449852..1450292 (-) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  P3L36_RS07410 (P3L36_07410) - 1450561..1452633 (+) 2073 WP_000726928.1 bifunctional metallophosphatase/5'-nucleotidase -
  P3L36_RS07415 (P3L36_07415) - 1452670..1453080 (-) 411 WP_000594935.1 peptide deformylase -
  P3L36_RS07420 (P3L36_07420) gdhA 1453150..1454499 (-) 1350 WP_000200442.1 NADP-specific glutamate dehydrogenase -
  P3L36_RS07425 (P3L36_07425) - 1454667..1455176 (+) 510 WP_000870956.1 DUF308 domain-containing protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=733760 P3L36_RS07405 WP_000431168.1 1449852..1450292(-) (rcrR) [Streptococcus agalactiae strain Guangzhou-SAG036]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=733760 P3L36_RS07405 WP_000431168.1 1449852..1450292(-) (rcrR) [Streptococcus agalactiae strain Guangzhou-SAG036]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATTTCTAAGTCTGTAGCGTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411