Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | N7921_RS07400 | Genome accession | NZ_CP106652 |
| Coordinates | 1412469..1414571 (-) | Length | 700 a.a. |
| NCBI ID | WP_263640172.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain 33.4 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1407469..1419571
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7921_RS07375 (N7921_07375) | - | 1408055..1408297 (+) | 243 | WP_034322108.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| N7921_RS07380 (N7921_07380) | - | 1408344..1409849 (-) | 1506 | WP_197197785.1 | ATP-binding protein | - |
| N7921_RS07385 (N7921_07385) | - | 1410054..1410509 (+) | 456 | WP_034281539.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| N7921_RS07390 (N7921_07390) | motB | 1410538..1411305 (-) | 768 | WP_111291312.1 | flagellar motor protein MotB | - |
| N7921_RS07395 (N7921_07395) | motA | 1411298..1412092 (-) | 795 | WP_111291313.1 | flagellar motor stator protein MotA | - |
| N7921_RS07400 (N7921_07400) | clpC | 1412469..1414571 (-) | 2103 | WP_263640172.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| N7921_RS07405 (N7921_07405) | - | 1414816..1415859 (+) | 1044 | WP_263640173.1 | hypothetical protein | - |
| N7921_RS07410 (N7921_07410) | queC | 1416136..1416792 (+) | 657 | WP_024424683.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| N7921_RS07415 (N7921_07415) | queD | 1416793..1417233 (+) | 441 | WP_095408338.1 | 6-carboxytetrahydropterin synthase QueD | - |
| N7921_RS07420 (N7921_07420) | queE | 1417226..1417957 (+) | 732 | WP_263640174.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| N7921_RS07425 (N7921_07425) | queF | 1417973..1418470 (+) | 498 | WP_003211403.1 | preQ(1) synthase | - |
| N7921_RS07430 (N7921_07430) | - | 1418730..1418948 (+) | 219 | WP_070325762.1 | hypothetical protein | - |
| N7921_RS07435 (N7921_07435) | - | 1419073..1419261 (-) | 189 | WP_003211747.1 | YkvS family protein | - |
Sequence
Protein
Download Length: 700 a.a. Molecular weight: 77840.36 Da Isoelectric Point: 5.0720
>NTDB_id=733710 N7921_RS07400 WP_263640172.1 1412469..1414571(-) (clpC) [Bacillus safensis strain 33.4]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAAGHAPNGEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTDKEHIVTAEDIQTIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDRNDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLTGFTVDVEHDEIVVKKG
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQAAGHAPNGEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTDKEHIVTAEDIQTIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDRNDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLTGFTVDVEHDEIVVKKG
Nucleotide
Download Length: 2103 bp
>NTDB_id=733710 N7921_RS07400 WP_263640172.1 1412469..1414571(-) (clpC) [Bacillus safensis strain 33.4]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTGAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTGTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAGGACATGCCCCAAACGGGGAGCAGCCAAAGCAAAAGGGCTTACTCGATGAGCTTGGCCGCAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAATCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TGAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGCTCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAAGCCTATCATGGTGTCACCTATTCAGATGAAGCAATCAAAGCGTGCGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAATCGATTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGACAAAGAACATATCGTCACAG
CAGAGGACATTCAGACCATTGTGGAACAAAAAACAGGCATTCCTGTCGGTAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAACATGCAGTTGACAAAGTGGCGAAAGCTGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATCTTCCTTCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATTATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAAGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTCACTCAGCAGCTACTTCAAACCAGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGACAGAAATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGGAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACGGAGATCTTGCTTGAAGAGGAGCAGCTTACTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTGAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTGTTTGGAGGAAGTTCAT
TCTTCTCTCAGGCAGCAGGACATGCCCCAAACGGGGAGCAGCCAAAGCAAAAGGGCTTACTCGATGAGCTTGGCCGCAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAATCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TGAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGCTCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAAGCCTATCATGGTGTCACCTATTCAGATGAAGCAATCAAAGCGTGCGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAATCGATTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGACAAAGAACATATCGTCACAG
CAGAGGACATTCAGACCATTGTGGAACAAAAAACAGGCATTCCTGTCGGTAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAACATGCAGTTGACAAAGTGGCGAAAGCTGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATCTTCCTTCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATTATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAAGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTCACTCAGCAGCTACTTCAAACCAGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGACAGAAATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGGAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACGGAGATCTTGCTTGAAGAGGAGCAGCTTACTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.64 |
100 |
0.597 |
| clpE | Streptococcus mutans UA159 |
57.064 |
100 |
0.589 |
| clpE | Streptococcus pneumoniae Rx1 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae D39 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae R6 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.387 |
100 |
0.573 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.179 |
95.714 |
0.519 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.086 |
93.143 |
0.439 |
| clpC | Streptococcus thermophilus LMD-9 |
45.975 |
92.286 |
0.424 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.666 |
92.286 |
0.421 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.795 |
90.571 |
0.406 |
| clpC | Streptococcus pneumoniae Rx1 |
44.992 |
89.857 |
0.404 |
| clpC | Streptococcus pneumoniae D39 |
44.992 |
89.857 |
0.404 |
| clpC | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |