Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   N7921_RS06340 Genome accession   NZ_CP106652
Coordinates   1224784..1224981 (+) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus safensis strain 33.4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1219784..1229981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7921_RS06310 (N7921_06310) - 1220188..1220367 (+) 180 WP_008348517.1 YjzC family protein -
  N7921_RS06315 (N7921_06315) - 1220541..1221806 (+) 1266 WP_144485526.1 MFS transporter -
  N7921_RS06320 (N7921_06320) - 1221921..1222115 (-) 195 WP_003211779.1 YjzD family protein -
  N7921_RS06325 (N7921_06325) - 1222328..1223068 (+) 741 WP_048238467.1 hypothetical protein -
  N7921_RS06330 (N7921_06330) - 1223142..1223717 (+) 576 WP_095408187.1 nad binding enzyme -
  N7921_RS06335 (N7921_06335) med 1223809..1224771 (+) 963 WP_048238469.1 BMP family ABC transporter substrate-binding protein Regulator
  N7921_RS06340 (N7921_06340) comZ 1224784..1224981 (+) 198 WP_024425054.1 ComZ family protein Regulator
  N7921_RS06345 (N7921_06345) - 1224992..1225225 (-) 234 WP_144470147.1 hypothetical protein -
  N7921_RS06350 (N7921_06350) - 1225397..1226335 (+) 939 WP_095408190.1 beta-ketoacyl-ACP synthase III -
  N7921_RS06355 (N7921_06355) fabF 1226357..1227598 (+) 1242 WP_041089814.1 beta-ketoacyl-ACP synthase II -
  N7921_RS06360 (N7921_06360) - 1227676..1228479 (+) 804 WP_095408191.1 DUF2268 domain-containing protein -
  N7921_RS06365 (N7921_06365) - 1228629..1229609 (+) 981 WP_144470149.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=733704 N7921_RS06340 WP_024425054.1 1224784..1224981(+) (comZ) [Bacillus safensis strain 33.4]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=733704 N7921_RS06340 WP_024425054.1 1224784..1224981(+) (comZ) [Bacillus safensis strain 33.4]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCGGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677