Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   N7921_RS04960 Genome accession   NZ_CP106652
Coordinates   960588..961379 (+) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus safensis strain 33.4     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 955588..966379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7921_RS04925 (N7921_04925) - 955675..956223 (+) 549 WP_024425227.1 thioredoxin family protein -
  N7921_RS04930 (N7921_04930) - 956557..957024 (+) 468 WP_024425226.1 thiol-disulfide oxidoreductase DCC family protein -
  N7921_RS04935 (N7921_04935) - 957061..958317 (-) 1257 WP_144485692.1 transcriptional regulator -
  N7921_RS04940 (N7921_04940) - 958591..959178 (+) 588 WP_144485689.1 nitroreductase family protein -
  N7921_RS04945 (N7921_04945) - 959217..959372 (-) 156 WP_024425223.1 YfhD family protein -
  N7921_RS04950 (N7921_04950) - 959434..959544 (-) 111 WP_017358836.1 YfhE family protein -
  N7921_RS04955 (N7921_04955) - 959597..960493 (-) 897 WP_144485687.1 TIGR01777 family oxidoreductase -
  N7921_RS04960 (N7921_04960) recX 960588..961379 (+) 792 WP_024425808.1 recombination regulator RecX Regulator
  N7921_RS04965 (N7921_04965) - 961383..961697 (+) 315 WP_144485685.1 YfhH family protein -
  N7921_RS04970 (N7921_04970) - 961795..961968 (-) 174 WP_008360604.1 YpzG family protein -
  N7921_RS04975 (N7921_04975) - 961994..962143 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  N7921_RS04980 (N7921_04980) - 962260..962532 (+) 273 WP_024425219.1 YfhJ family protein -
  N7921_RS04985 (N7921_04985) - 962832..963815 (+) 984 WP_144485683.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=733696 N7921_RS04960 WP_024425808.1 960588..961379(+) (recX) [Bacillus safensis strain 33.4]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=733696 N7921_RS04960 WP_024425808.1 960588..961379(+) (recX) [Bacillus safensis strain 33.4]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGAATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGTAAAGGACCGTCCGTCTTAAAAAAAG
AATTGAAGCTCAAAGGCATAGACGATGACACGATTGAACAGGCGCTATCGCAATACCCTGATGACCTACAGCTCGAGGAA
GCTGTAAAGCAGGTGCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAAGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGGTATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639