Detailed information NTG0733573

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P6O79_RS17520
• Genome accession: NZ_CP120633
• Coordinates: 3523697..3524722 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain USVAST219
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3518697..3529722

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P6O79_RS17490 (P6O79_17490)	zapB	3518781..3519026 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
P6O79_RS17495 (P6O79_17495)	rraA	3519111..3519596 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P6O79_RS17500 (P6O79_17500)	menA	3519689..3520615 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P6O79_RS17505 (P6O79_17505)	hslU	3520682..3522013 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
P6O79_RS17510 (P6O79_17510)	hslV	3522023..3522553 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P6O79_RS17515 (P6O79_17515)	ftsN	3522646..3523605 (-)	960	WP_000068834.1	cell division protein FtsN	-
P6O79_RS17520 (P6O79_17520)	cytR	3523697..3524722 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
P6O79_RS17525 (P6O79_17525)	priA	3524878..3527076 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
P6O79_RS17530 (P6O79_17530)	rpmE	3527279..3527491 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
P6O79_RS17535 (P6O79_17535)	yiiX	3527552..3528160 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
P6O79_RS17540 (P6O79_17540)	metJ	3528220..3528537 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=733573 P6O79_RS17520 WP_000644908.1 3523697..3524722(-) (cytR) [Escherichia coli strain USVAST219]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=733573 P6O79_RS17520 WP_000644908.1 3523697..3524722(-) (cytR) [Escherichia coli strain USVAST219]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625