Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P5647_RS15445 Genome accession   NZ_CP120622
Coordinates   2966118..2966828 (-) Length   236 a.a.
NCBI ID   WP_003229230.1    Uniprot ID   O34977
Organism   Bacillus subtilis strain DSM 1090     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2961118..2971828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5647_RS15425 (P5647_15425) cysK 2961169..2962104 (+) 936 WP_003229237.1 cysteine synthase A -
  P5647_RS15430 (P5647_15430) pepV 2962138..2963529 (-) 1392 WP_004399126.1 dipeptidase PepV -
  P5647_RS15435 (P5647_15435) pbuO 2963626..2964924 (+) 1299 WP_003229234.1 hypoxanthine/guanine permease PbuO -
  P5647_RS15440 (P5647_15440) ythQ 2964964..2966121 (-) 1158 WP_003229232.1 ABC transporter permease -
  P5647_RS15445 (P5647_15445) pptA 2966118..2966828 (-) 711 WP_003229230.1 ABC transporter ATP-binding protein Regulator
  P5647_RS15450 (P5647_15450) ytzE 2967119..2967340 (+) 222 WP_003152337.1 DeoR family transcriptional regulator -
  P5647_RS15455 (P5647_15455) rsuA 2967461..2968180 (-) 720 WP_003229226.1 pseudouridine synthase -
  P5647_RS15460 (P5647_15460) murJ 2968249..2969883 (-) 1635 WP_003229224.1 lipid II flippase MurJ -
  P5647_RS15465 (P5647_15465) ytfP 2970085..2971347 (+) 1263 WP_003229222.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26506.56 Da        Isoelectric Point: 5.3508

>NTDB_id=733477 P5647_RS15445 WP_003229230.1 2966118..2966828(-) (pptA) [Bacillus subtilis strain DSM 1090]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQGDRL

Nucleotide


Download         Length: 711 bp        

>NTDB_id=733477 P5647_RS15445 WP_003229230.1 2966118..2966828(-) (pptA) [Bacillus subtilis strain DSM 1090]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTGGTTGGACTGATCGGAGCTAACGGCGCAGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTCTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTTCACGGCATTGAAGAGAGTGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTAGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATGTTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34977

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432