Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P5657_RS06010 Genome accession   NZ_CP120621
Coordinates   1158687..1159400 (-) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain DSM 13019     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1153687..1164400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5657_RS05990 (P5657_05990) ghrB 1153832..1154809 (+) 978 WP_134991786.1 D-glycerate dehydrogenase -
  P5657_RS05995 (P5657_05995) psdB 1154846..1156786 (-) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  P5657_RS06000 (P5657_06000) psdA 1156761..1157540 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  P5657_RS06005 (P5657_06005) psdS 1157623..1158693 (-) 1071 WP_064671548.1 two-component sensor histidine kinase PsdS -
  P5657_RS06010 (P5657_06010) braR 1158687..1159400 (-) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  P5657_RS06015 (P5657_06015) - 1159547..1159756 (+) 210 WP_021480676.1 hypothetical protein -
  P5657_RS06020 (P5657_06020) yvcN 1159792..1160556 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  P5657_RS06025 (P5657_06025) crh 1160557..1160814 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  P5657_RS06030 (P5657_06030) whiA 1160838..1161788 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  P5657_RS06035 (P5657_06035) mgfK 1161811..1162764 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  P5657_RS06040 (P5657_06040) rapZ 1162766..1163653 (-) 888 WP_134991785.1 RNase adapter RapZ -
  P5657_RS06045 (P5657_06045) rppI 1163679..1164155 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=733249 P5657_RS06010 WP_003228163.1 1158687..1159400(-) (braR) [Bacillus subtilis strain DSM 13019]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=733249 P5657_RS06010 WP_003228163.1 1158687..1159400(-) (braR) [Bacillus subtilis strain DSM 13019]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATAGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43