Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P5657_RS03585 Genome accession   NZ_CP120621
Coordinates   671589..672383 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain DSM 13019     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 666589..677383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5657_RS03565 (P5657_03565) walR 666831..667538 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  P5657_RS03570 (P5657_03570) walK 667546..669381 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  P5657_RS03575 (P5657_03575) walH 669371..670738 (+) 1368 WP_072175742.1 WalRK two-component regulatory system regulator WalH -
  P5657_RS03580 (P5657_03580) walI 670725..671567 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  P5657_RS03585 (P5657_03585) vicX 671589..672383 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  P5657_RS03590 (P5657_03590) htrA 672465..673667 (+) 1203 WP_134991656.1 serine protease HtrC Regulator
  P5657_RS03595 (P5657_03595) - 673687..673815 (+) 129 WP_003242634.1 hypothetical protein -
  P5657_RS03600 (P5657_03600) - 673932..674120 (+) 189 Protein_658 ATP-binding protein -
  P5657_RS03605 (P5657_03605) rocR 674102..675487 (-) 1386 WP_134991657.1 arginine utilization regulatory protein RocR -
  P5657_RS03610 (P5657_03610) rocD 675728..676933 (+) 1206 WP_047183487.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=733239 P5657_RS03585 WP_003226939.1 671589..672383(+) (vicX) [Bacillus subtilis strain DSM 13019]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=733239 P5657_RS03585 WP_003226939.1 671589..672383(+) (vicX) [Bacillus subtilis strain DSM 13019]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTTGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGTCGAAAACTCGCATTAATGACAGATACAGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATATGACACCGATCCGAAGAAGGCCACGCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53