Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   N7761_RS10095 Genome accession   NZ_CP104882
Coordinates   2049474..2051897 (+) Length   807 a.a.
NCBI ID   WP_041915489.1    Uniprot ID   -
Organism   Aggregatibacter actinomycetemcomitans strain IDHaas10a     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2044474..2056897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7761_RS10070 (N7761_10070) - 2046231..2046365 (+) 135 WP_005567190.1 hypothetical protein -
  N7761_RS10075 (N7761_10075) - 2046446..2046592 (+) 147 WP_005567188.1 hypothetical protein -
  N7761_RS10080 (N7761_10080) folK 2046663..2047163 (-) 501 WP_005570294.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  N7761_RS10085 (N7761_10085) pcnB 2047156..2048622 (-) 1467 WP_050846365.1 polynucleotide adenylyltransferase PcnB -
  N7761_RS10090 (N7761_10090) dksA 2048739..2049176 (-) 438 WP_005556693.1 RNA polymerase-binding protein DksA -
  N7761_RS10095 (N7761_10095) rec2 2049474..2051897 (+) 2424 WP_041915489.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  N7761_RS10100 (N7761_10100) msbA 2051944..2053692 (+) 1749 WP_005567181.1 lipid A ABC transporter ATP-binding protein/permease MsbA -
  N7761_RS10105 (N7761_10105) lpxK 2053711..2054685 (+) 975 WP_005589925.1 tetraacyldisaccharide 4'-kinase -
  N7761_RS10110 (N7761_10110) - 2054707..2054886 (+) 180 WP_005567179.1 Trm112 family protein -
  N7761_RS10115 (N7761_10115) kdsB 2054888..2055661 (+) 774 WP_005570275.1 3-deoxy-manno-octulosonate cytidylyltransferase -

Sequence

Protein


Download         Length: 807 a.a.        Molecular weight: 91905.64 Da        Isoelectric Point: 9.8033

>NTDB_id=733200 N7761_RS10095 WP_041915489.1 2049474..2051897(+) (rec2) [Aggregatibacter actinomycetemcomitans strain IDHaas10a]
MSVSLDKLAIALIFSGLTLLFLPDRFLLSWQTACYLLLLLCPLMLLAYALRQDKIKQIVMWLLILMIQSAYVHQSAISIL
TQADNLANLPKTVHREFTVKEILHQQHYQTLVIRAKLAENLPEQRIYAQWKLKQPVNPGERYAGNLRLRALSSRLNFDGF
DRQPWYFGKHITAWAEIKSAVKLENVFSLRQTALNQALQQTENLPRQGLLLALGFGERFRLDQKTWQIYQKTNTAHLIAI
SGLHIGLAMMLGFTLARLLQFALPTRYISPTFPILCGFIFALLYSQLAGLAIPTLRAMIALAMLYAIQYWRRYWTVWQFL
LRVVALLIFIDPLMLLSTSFWLSVGAVTCLIVWYQYFPLSLLQWRGHSLANSPWRKVRYVFGLFHLQFGLLWLFTPIQLL
FFNGISLNSFIANVIAVPPYSFVLVPLVLFAVVTQGAWHSWQLANDLAEKITALLTPWQDDWLAISIPHSLWITLCLTFL
FLVALYVIYKPPKPITSTLALSRQHRFKGFHFNPELSLPLRKSAYCVGGGLIALCCLTLISQSISRPNWQLETLDVGQGL
ATLIVKDGKGVLYDTGPSWKGGSMAQLEILPYLQRQGIDLEWLILSHDDNDHAGGAKDILAMYPHIQLTTASQKRYGSQN
TEKNDRTFCQAGKQWHWQGLHFTVLSPENIVPRAENRDSCTLLLTDGTHHILLTGDADLSVEYKILPKLGKIHVLQVGHH
GSKTSTGQALVQHIQPDIALISSGRWNPWHFPHKDVVARLQQQGSQIYNTAHSGQISLLFYNEEIKIQTARAEFSPWYRR
LIGLSTK

Nucleotide


Download         Length: 2424 bp        

>NTDB_id=733200 N7761_RS10095 WP_041915489.1 2049474..2051897(+) (rec2) [Aggregatibacter actinomycetemcomitans strain IDHaas10a]
GTGAGCGTTTCGTTGGATAAGTTGGCTATAGCCCTGATTTTTAGCGGTTTAACATTATTGTTTTTGCCCGATCGCTTTTT
ATTATCGTGGCAAACGGCGTGCTATTTACTCCTCTTATTATGTCCACTCATGTTGCTTGCTTATGCCCTGCGACAGGACA
AAATCAAGCAAATAGTAATGTGGCTACTGATCTTGATGATTCAGTCCGCTTACGTCCACCAATCGGCAATTTCCATACTG
ACCCAGGCGGATAATCTTGCCAATCTGCCGAAAACCGTTCACCGCGAATTTACCGTCAAGGAAATTCTGCATCAGCAGCA
TTATCAAACCCTGGTTATTCGCGCCAAACTCGCCGAAAATCTTCCCGAACAACGTATTTACGCGCAATGGAAACTCAAGC
AACCAGTCAACCCCGGCGAACGTTACGCAGGCAATTTACGCTTGCGAGCGCTTTCTTCCCGCCTGAATTTTGACGGTTTT
GACCGCCAGCCATGGTATTTCGGCAAGCACATCACCGCTTGGGCAGAGATTAAAAGTGCGGTCAAATTGGAAAACGTTTT
TTCGTTACGCCAAACCGCTCTCAATCAAGCCTTACAACAAACGGAGAATTTACCCCGACAAGGCTTGTTGCTGGCACTCG
GTTTTGGCGAACGTTTCCGCTTAGACCAAAAAACTTGGCAAATTTATCAAAAAACAAATACGGCGCATTTAATTGCCATT
TCAGGGCTGCATATCGGACTGGCGATGATGCTGGGTTTTACCTTGGCGCGTCTACTGCAATTTGCCTTGCCGACGCGTTA
CATCAGCCCGACATTTCCGATTCTGTGCGGATTCATTTTTGCGTTGTTATACAGCCAACTGGCGGGGCTTGCTATTCCGA
CTTTACGCGCTATGATTGCGTTAGCCATGCTCTACGCGATTCAGTATTGGCGACGATATTGGACGGTATGGCAATTCTTG
TTAAGAGTGGTTGCCTTGCTGATTTTTATCGATCCGCTCATGTTACTTTCCACCAGCTTTTGGTTGTCGGTGGGCGCAGT
GACCTGTCTGATTGTTTGGTATCAGTATTTTCCGTTGTCTCTATTGCAATGGCGCGGCCATTCCCTTGCCAATTCGCCGT
GGCGGAAAGTGCGGTATGTTTTCGGCTTGTTTCATTTGCAATTCGGTCTGCTCTGGCTGTTCACGCCCATTCAGCTGTTA
TTTTTTAACGGCATTTCGTTAAATAGTTTTATCGCCAATGTCATCGCCGTGCCGCCTTATAGCTTCGTTTTGGTCCCGTT
GGTGTTATTTGCCGTAGTCACCCAAGGTGCGTGGCATTCGTGGCAGCTCGCCAACGATTTGGCGGAAAAAATCACCGCAC
TTTTGACGCCCTGGCAGGATGACTGGTTGGCAATTTCCATTCCGCACAGTTTATGGATAACCCTATGTTTAACCTTTCTT
TTTTTAGTGGCGCTCTATGTTATTTATAAACCGCCCAAACCGATAACATCCACTTTAGCATTGTCAAGGCAGCACCGCTT
TAAAGGATTTCATTTTAATCCGGAACTAAGTTTACCGTTACGAAAAAGCGCTTATTGCGTGGGCGGTGGGCTGATTGCCC
TGTGTTGCCTGACGTTAATTTCTCAGTCTATTTCACGTCCGAACTGGCAATTGGAAACCTTGGACGTGGGGCAAGGGTTG
GCAACTTTAATCGTGAAAGACGGCAAAGGCGTGCTTTACGATACCGGCCCGAGTTGGAAGGGCGGCAGTATGGCACAATT
GGAAATTCTGCCTTATTTACAACGGCAAGGCATTGATTTGGAATGGCTGATATTAAGCCATGACGACAACGATCACGCAG
GTGGTGCCAAAGATATTTTAGCAATGTATCCCCATATTCAACTGACCACCGCTTCACAAAAGCGATATGGTTCCCAAAAC
ACCGAAAAAAATGACCGCACTTTTTGTCAAGCCGGTAAACAATGGCATTGGCAGGGGTTGCATTTTACCGTGCTATCACC
GGAGAATATCGTGCCCCGTGCGGAAAATCGGGATTCCTGCACACTTTTATTAACCGATGGCACGCACCATATTTTGCTGA
CGGGCGACGCGGATCTTAGCGTGGAATATAAGATCCTACCGAAACTTGGCAAAATCCATGTGTTACAAGTAGGGCATCAC
GGTAGCAAAACCTCGACGGGGCAGGCATTAGTGCAACATATTCAACCGGACATTGCGCTGATTTCCAGCGGACGCTGGAA
CCCATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAACAAGGATCACAAATTTATAATACGGCGCATAGCG
GGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTATCGCAGA
TTGATTGGCTTGAGCACGAAATAA

Domains

Predicted by InterproScan.

Domain of unknown function (DUF4131) (DUF4131)

(34-179)

Metallo-beta-lactamase superfamily (Lactamase_B)

(555-743)

Competence protein (Competence)

(213-486)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

52.709

100

0.53