Detailed information NTG0733156

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: N8A75_RS20160
• Genome accession: NZ_CP104878
• Coordinates: 3730530..3731675 (+)
• Length: 381 a.a.
• NCBI ID: WP_262091130.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 4ZT
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3725530..3736675

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8A75_RS20140 (N8A75_20140)	albF	3725545..3726825 (+)	1281	WP_029726079.1	M16 family metallopeptidase	-
N8A75_RS20145 (N8A75_20145)	albG	3726822..3727523 (+)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
N8A75_RS20150 (N8A75_20150)	ywhL	3727529..3728905 (-)	1377	WP_015250987.1	YncE family protein	-
N8A75_RS20155 (N8A75_20155)	ywhK	3728945..3730300 (-)	1356	WP_129110589.1	YncE family protein	-
N8A75_RS22055	-	3730297..3730527 (-)	231	Protein_3913	hypothetical protein	-
N8A75_RS20160 (N8A75_20160)	rapF	3730530..3731675 (+)	1146	WP_262091130.1	response regulator aspartate phosphatase RapF	Regulator
N8A75_RS20165 (N8A75_20165)	phrF	3731659..3731778 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
N8A75_RS20170 (N8A75_20170)	ywhH	3731876..3732349 (+)	474	Protein_3916	YbaK/EbsC family protein	-
N8A75_RS20175 (N8A75_20175)	speB	3732380..3733252 (-)	873	WP_003227545.1	agmatinase	-
N8A75_RS20180 (N8A75_20180)	speE	3733313..3734143 (-)	831	WP_003227543.1	spermidine synthase	-
N8A75_RS20185 (N8A75_20185)	pbpG	3734346..3736421 (+)	2076	WP_029726084.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45617.13 Da
• Isoelectric Point: 5.1493

>NTDB_id=733156 N8A75_RS20160 WP_262091130.1 3730530..3731675(+) (rapF) [Bacillus subtilis strain 4ZT]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDIIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=733156 N8A75_RS20160 WP_262091130.1 3730530..3731675(+) (rapF) [Bacillus subtilis strain 4ZT]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATATAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572