Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   N8A75_RS13030 Genome accession   NZ_CP104878
Coordinates   2398714..2399517 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain 4ZT     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2393714..2404517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS13005 (N8A75_13005) glpQB 2394852..2395583 (-) 732 WP_046160572.1 glycerophosphodiester phosphodiesterase -
  N8A75_RS13010 (N8A75_13010) yqiI 2395662..2396282 (-) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  N8A75_RS13015 (N8A75_13015) - 2396302..2396598 (-) 297 WP_014480225.1 hypothetical protein -
  N8A75_RS13020 (N8A75_13020) - 2396906..2397058 (+) 153 WP_122060483.1 hypothetical protein -
  N8A75_RS13025 (N8A75_13025) yqiG 2397131..2398249 (+) 1119 WP_046160573.1 NADH-dependent flavin oxidoreductase -
  N8A75_RS13030 (N8A75_13030) spo0A 2398714..2399517 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  N8A75_RS13035 (N8A75_13035) spoIVB 2399793..2401073 (-) 1281 WP_046160574.1 SpoIVB peptidase -
  N8A75_RS13040 (N8A75_13040) recN 2401248..2402978 (-) 1731 WP_129110524.1 DNA repair protein RecN Machinery gene
  N8A75_RS13045 (N8A75_13045) argR 2403015..2403464 (-) 450 WP_003230265.1 arginine repressor ArgR -
  N8A75_RS13050 (N8A75_13050) yqxC 2403562..2404407 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=733120 N8A75_RS13030 WP_003226427.1 2398714..2399517(-) (spo0A) [Bacillus subtilis strain 4ZT]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=733120 N8A75_RS13030 WP_003226427.1 2398714..2399517(-) (spo0A) [Bacillus subtilis strain 4ZT]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTTGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1