Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   N8A75_RS07695 Genome accession   NZ_CP104878
Coordinates   1466836..1467411 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain 4ZT     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1461836..1472411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS07665 (N8A75_07665) dapD 1462024..1462734 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  N8A75_RS07670 (N8A75_07670) dapI 1462804..1463928 (+) 1125 WP_043857415.1 N-acetyldiaminopimelate deacetylase -
  N8A75_RS07675 (N8A75_07675) ykuS 1463990..1464235 (+) 246 WP_003232382.1 YkuS family protein -
  N8A75_RS07680 (N8A75_07680) mscT 1464272..1465075 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  N8A75_RS07685 (N8A75_07685) ahpA 1465312..1465854 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  N8A75_RS07690 (N8A75_07690) ykuV 1465924..1466370 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  N8A75_RS07695 (N8A75_07695) rok 1466836..1467411 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  N8A75_RS07700 (N8A75_07700) cse15 1467452..1468417 (-) 966 WP_046160341.1 spore protein Cse15 -
  N8A75_RS07705 (N8A75_07705) mobA 1468554..1469153 (+) 600 WP_046160342.1 molybdenum cofactor guanylyltransferase -
  N8A75_RS07710 (N8A75_07710) moeB 1469204..1470223 (+) 1020 WP_046160343.1 molybdopterin-synthase adenylyltransferase MoeB -
  N8A75_RS07715 (N8A75_07715) glp 1470241..1471533 (+) 1293 WP_046160344.1 gephyrin-like molybdotransferase Glp -
  N8A75_RS07720 (N8A75_07720) mobB 1471494..1472015 (+) 522 WP_046160345.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=733113 N8A75_RS07695 WP_003232378.1 1466836..1467411(+) (rok) [Bacillus subtilis strain 4ZT]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=733113 N8A75_RS07695 WP_003232378.1 1466836..1467411(+) (rok) [Bacillus subtilis strain 4ZT]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1