Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   N8A75_RS06225 Genome accession   NZ_CP104878
Coordinates   1205286..1206437 (+) Length   383 a.a.
NCBI ID   WP_046380934.1    Uniprot ID   A0AA96USA1
Organism   Bacillus subtilis strain 4ZT     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1200286..1211437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS06190 (N8A75_06190) yjbB 1200957..1202174 (+) 1218 WP_080478438.1 MFS transporter -
  N8A75_RS06195 (N8A75_06195) yjbC 1202339..1202917 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  N8A75_RS06200 (N8A75_06200) spx 1203098..1203493 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  N8A75_RS06205 (N8A75_06205) yjbE 1203536..1204192 (-) 657 WP_003232944.1 TerC family protein -
  N8A75_RS06210 (N8A75_06210) - 1204362..1204502 (+) 141 WP_119122854.1 hypothetical protein -
  N8A75_RS06215 (N8A75_06215) mecA 1204469..1205125 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  N8A75_RS06220 (N8A75_06220) - 1205120..1205242 (-) 123 WP_003245684.1 hypothetical protein -
  N8A75_RS06225 (N8A75_06225) coiA 1205286..1206437 (+) 1152 WP_046380934.1 competence protein CoiA Machinery gene
  N8A75_RS06230 (N8A75_06230) pepF 1206667..1208496 (+) 1830 WP_206734712.1 oligoendopeptidase F -
  N8A75_RS06235 (N8A75_06235) - 1208534..1208701 (-) 168 WP_003244944.1 hypothetical protein -
  N8A75_RS06240 (N8A75_06240) spxH 1209016..1209915 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  N8A75_RS06245 (N8A75_06245) bhbI 1209912..1210310 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  N8A75_RS06250 (N8A75_06250) cwlQ 1210565..1211299 (-) 735 WP_250621098.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=733108 N8A75_RS06225 WP_046380934.1 1205286..1206437(+) (coiA) [Bacillus subtilis strain 4ZT]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=733108 N8A75_RS06225 WP_046380934.1 1205286..1206437(+) (coiA) [Bacillus subtilis strain 4ZT]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963