Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P5649_RS05610 Genome accession   NZ_CP120613
Coordinates   1083330..1084019 (+) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain DSM 23521     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1078330..1089019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5649_RS05590 (P5649_05590) iolG 1079484..1080518 (+) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  P5649_RS05595 (P5649_05595) iolH 1080538..1081407 (+) 870 WP_003243149.1 sugar phosphate isomerase/epimerase -
  P5649_RS05600 (P5649_05600) iolI 1081493..1082329 (+) 837 WP_003244546.1 2-keto-myo-inositol isomerase -
  P5649_RS05605 (P5649_05605) iolJ 1082350..1083222 (+) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  P5649_RS05610 (P5649_05610) braR 1083330..1084019 (+) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  P5649_RS05615 (P5649_05615) yxdK 1084016..1084993 (+) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  P5649_RS05620 (P5649_05620) yxdL 1085137..1085910 (+) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  P5649_RS05625 (P5649_05625) yxdM 1085885..1087753 (+) 1869 WP_003244410.1 ABC transporter permease YxdM -
  P5649_RS05630 (P5649_05630) yxeA 1087767..1088114 (+) 348 WP_003227084.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=733096 P5649_RS05610 WP_003243527.1 1083330..1084019(+) (braR) [Bacillus subtilis strain DSM 23521]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=733096 P5649_RS05610 WP_003243527.1 1083330..1084019(+) (braR) [Bacillus subtilis strain DSM 23521]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406