Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P5649_RS05220 Genome accession   NZ_CP120613
Coordinates   1006653..1007447 (+) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain DSM 23521     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1001653..1012447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5649_RS05200 (P5649_05200) walR 1001895..1002602 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  P5649_RS05205 (P5649_05205) walK 1002610..1004445 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  P5649_RS05210 (P5649_05210) walH 1004435..1005802 (+) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  P5649_RS05215 (P5649_05215) walI 1005789..1006631 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  P5649_RS05220 (P5649_05220) vicX 1006653..1007447 (+) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  P5649_RS05225 (P5649_05225) htrA 1007529..1008731 (+) 1203 WP_009969578.1 serine protease HtrC Regulator
  P5649_RS05230 (P5649_05230) - 1008751..1008879 (+) 129 WP_003242634.1 hypothetical protein -
  P5649_RS05235 (P5649_05235) - 1008996..1009184 (+) 189 Protein_988 ATP-binding protein -
  P5649_RS05240 (P5649_05240) rocR 1009166..1010551 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  P5649_RS05245 (P5649_05245) rocD 1010792..1011997 (+) 1206 WP_003242970.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=733094 P5649_RS05220 WP_003242676.1 1006653..1007447(+) (vicX) [Bacillus subtilis strain DSM 23521]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=733094 P5649_RS05220 WP_003242676.1 1006653..1007447(+) (vicX) [Bacillus subtilis strain DSM 23521]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53