Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   P5649_RS04595 Genome accession   NZ_CP120613
Coordinates   898213..899040 (-) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis strain DSM 23521     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 893213..904040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5649_RS04570 (P5649_04570) abrB 895559..895849 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  P5649_RS04575 (P5649_04575) rsmI 895898..896776 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  P5649_RS04580 (P5649_04580) yazA 896751..897050 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  P5649_RS04585 (P5649_04585) trmNF 897037..897780 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  P5649_RS04590 (P5649_04590) yabA 897839..898198 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  P5649_RS04595 (P5649_04595) yaaT 898213..899040 (-) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  P5649_RS04600 (P5649_04600) holB 899043..900032 (-) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  P5649_RS04605 (P5649_04605) yaaR 900044..900484 (-) 441 WP_009966249.1 YaaR family protein -
  P5649_RS04610 (P5649_04610) darA 900497..900826 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  P5649_RS04615 (P5649_04615) tmk 900900..901538 (-) 639 WP_003243137.1 dTMP kinase -
  P5649_RS04620 (P5649_04620) efpO 901535..902977 (-) 1443 WP_003243352.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=733088 P5649_RS04595 WP_003243571.1 898213..899040(-) (yaaT) [Bacillus subtilis strain DSM 23521]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=733088 P5649_RS04595 WP_003243571.1 898213..899040(-) (yaaT) [Bacillus subtilis strain DSM 23521]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1