Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P5661_RS16165 Genome accession   NZ_CP120600
Coordinates   3051423..3052118 (-) Length   231 a.a.
NCBI ID   WP_070547660.1    Uniprot ID   -
Organism   Bacillus subtilis strain PRO112     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3046423..3057118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5661_RS16145 (P5661_16145) yttA 3046850..3047596 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  P5661_RS16150 (P5661_16150) bceB 3047633..3049573 (-) 1941 WP_077671488.1 bacitracin ABC transporter permease BceB -
  P5661_RS16155 (P5661_16155) bceA 3049563..3050324 (-) 762 WP_103803281.1 bacitracin ABC transporter ATP-binding protein BceA -
  P5661_RS16160 (P5661_16160) bceS 3050426..3051430 (-) 1005 WP_277708912.1 two-component sensor histidine kinase BceS -
  P5661_RS16165 (P5661_16165) braR 3051423..3052118 (-) 696 WP_070547660.1 two-component response regulator BceR Regulator
  P5661_RS16170 (P5661_16170) ytrF 3052215..3053525 (-) 1311 WP_021480351.1 ABC transporter permease YtrF -
  P5661_RS16175 (P5661_16175) ytrE 3053515..3054210 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  P5661_RS16180 (P5661_16180) ytrD 3054225..3055202 (-) 978 WP_277708913.1 ABC transporter permease YtrD -
  P5661_RS16185 (P5661_16185) ytrC 3055232..3056218 (-) 987 WP_015483589.1 ABC transporter permease YtrC -
  P5661_RS16190 (P5661_16190) ytrB 3056212..3057090 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=733022 P5661_RS16165 WP_070547660.1 3051423..3052118(-) (braR) [Bacillus subtilis strain PRO112]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=733022 P5661_RS16165 WP_070547660.1 3051423..3052118(-) (braR) [Bacillus subtilis strain PRO112]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377