Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P5661_RS05340 Genome accession   NZ_CP120600
Coordinates   1030687..1031430 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain PRO112     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1025687..1036430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5661_RS05305 (P5661_05305) yhaI 1026018..1026359 (+) 342 WP_009966921.1 YhaI family protein -
  P5661_RS05310 (P5661_05310) scoC 1026356..1026967 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  P5661_RS05315 (P5661_05315) yhaH 1027145..1027501 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  P5661_RS05320 (P5661_05320) - 1027630..1027821 (+) 192 WP_014476318.1 hypothetical protein -
  P5661_RS05325 (P5661_05325) trpP 1027894..1028412 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  P5661_RS05330 (P5661_05330) serC 1028537..1029616 (-) 1080 WP_072175684.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  P5661_RS05335 (P5661_05335) hinT 1029763..1030200 (-) 438 WP_003233231.1 HIT family protein -
  P5661_RS05340 (P5661_05340) pptA 1030687..1031430 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  P5661_RS05345 (P5661_05345) ecsB 1031423..1032649 (+) 1227 WP_277709378.1 ABC transporter permease EcsB -
  P5661_RS05350 (P5661_05350) ecsC 1032669..1033379 (+) 711 WP_021479638.1 EcsC family protein -
  P5661_RS05355 (P5661_05355) sndC 1033397..1034587 (-) 1191 WP_277709379.1 N-acetyl amino acid acetylase SndC -
  P5661_RS05360 (P5661_05360) - 1034659..1036050 (-) 1392 WP_072173863.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=732940 P5661_RS05340 WP_003233230.1 1030687..1031430(+) (pptA) [Bacillus subtilis strain PRO112]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=732940 P5661_RS05340 WP_003233230.1 1030687..1031430(+) (pptA) [Bacillus subtilis strain PRO112]
ATGTCTCTGCTATCGGTAAAAGACTTAACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACATATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCAAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGTTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547