Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P5622_RS08990 Genome accession   NZ_CP120598
Coordinates   1721481..1722176 (+) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis strain PRO115     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1716481..1727176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5622_RS08965 (P5622_08965) ytrB 1716509..1717387 (+) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -
  P5622_RS08970 (P5622_08970) ytrC 1717381..1718367 (+) 987 WP_003246175.1 ABC transporter permease YtrC -
  P5622_RS08975 (P5622_08975) ytrD 1718397..1719374 (+) 978 WP_004398887.1 ABC transporter permease YtrD -
  P5622_RS08980 (P5622_08980) ytrE 1719389..1720084 (+) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  P5622_RS08985 (P5622_08985) ytrF 1720074..1721384 (+) 1311 WP_004398682.1 ABC transporter permease YtrF -
  P5622_RS08990 (P5622_08990) braR 1721481..1722176 (+) 696 WP_004399109.1 two-component response regulator BceR Regulator
  P5622_RS08995 (P5622_08995) bceS 1722169..1723173 (+) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  P5622_RS09000 (P5622_09000) bceA 1723275..1724036 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  P5622_RS09005 (P5622_09005) bceB 1724026..1725966 (+) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  P5622_RS09010 (P5622_09010) yttA 1726003..1726749 (-) 747 WP_003229141.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=732818 P5622_RS08990 WP_004399109.1 1721481..1722176(+) (braR) [Bacillus subtilis strain PRO115]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=732818 P5622_RS08990 WP_004399109.1 1721481..1722176(+) (braR) [Bacillus subtilis strain PRO115]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377