Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P5622_RS04050 Genome accession   NZ_CP120598
Coordinates   762367..763056 (+) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain PRO115     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 757367..768056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5622_RS04030 (P5622_04030) iolG 758521..759555 (+) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  P5622_RS04035 (P5622_04035) iolH 759575..760444 (+) 870 WP_003243149.1 sugar phosphate isomerase/epimerase -
  P5622_RS04040 (P5622_04040) iolI 760530..761366 (+) 837 WP_003244546.1 2-keto-myo-inositol isomerase -
  P5622_RS04045 (P5622_04045) iolJ 761387..762259 (+) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  P5622_RS04050 (P5622_04050) braR 762367..763056 (+) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  P5622_RS04055 (P5622_04055) yxdK 763053..764030 (+) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  P5622_RS04060 (P5622_04060) yxdL 764174..764947 (+) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  P5622_RS04065 (P5622_04065) yxdM 764922..766790 (+) 1869 WP_003244410.1 ABC transporter permease YxdM -
  P5622_RS04070 (P5622_04070) yxeA 766804..767151 (+) 348 WP_003227084.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=732796 P5622_RS04050 WP_003243527.1 762367..763056(+) (braR) [Bacillus subtilis strain PRO115]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=732796 P5622_RS04050 WP_003243527.1 762367..763056(+) (braR) [Bacillus subtilis strain PRO115]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406