Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P5622_RS03660 Genome accession   NZ_CP120598
Coordinates   685692..686486 (+) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain PRO115     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 680692..691486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5622_RS03640 (P5622_03640) walR 680934..681641 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  P5622_RS03645 (P5622_03645) walK 681649..683484 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  P5622_RS03650 (P5622_03650) walH 683474..684841 (+) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  P5622_RS03655 (P5622_03655) walI 684828..685670 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  P5622_RS03660 (P5622_03660) vicX 685692..686486 (+) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  P5622_RS03665 (P5622_03665) htrA 686568..687770 (+) 1203 WP_009969578.1 serine protease HtrC Regulator
  P5622_RS03670 (P5622_03670) - 687790..687918 (+) 129 WP_003242634.1 hypothetical protein -
  P5622_RS03675 (P5622_03675) - 688035..688223 (+) 189 Protein_670 ATP-binding protein -
  P5622_RS03680 (P5622_03680) rocR 688205..689590 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  P5622_RS03685 (P5622_03685) rocD 689831..691036 (+) 1206 WP_003242970.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=732794 P5622_RS03660 WP_003242676.1 685692..686486(+) (vicX) [Bacillus subtilis strain PRO115]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=732794 P5622_RS03660 WP_003242676.1 685692..686486(+) (vicX) [Bacillus subtilis strain PRO115]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53